Hb_000920_360

Information

Type -
Description -
Location Contig920: 245251-246407
Sequence    

Annotation

kegg
ID cit:102609574
description (RS)-norcoclaurine 6-O-methyltransferase-like
nr
ID XP_012088324.1
description PREDICTED: (R,S)-reticuline 7-O-methyltransferase-like [Jatropha curcas]
swissprot
ID Q54B59
description O-methyltransferase 12 OS=Dictyostelium discoideum GN=omt12 PE=1 SV=1
trembl
ID A0A067JMX5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25820 PE=4 SV=1
Gene Ontology
ID GO:0008171
description ( )-reticuline 7-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000920_360 0.0 - - PREDICTED: (R,S)-reticuline 7-O-methyltransferase-like [Jatropha curcas]
2 Hb_000286_190 0.0615074404 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
3 Hb_005797_030 0.082633595 - - PREDICTED: MATE efflux family protein LAL5-like [Jatropha curcas]
4 Hb_029508_030 0.0910587604 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
5 Hb_000608_450 0.1007122905 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
6 Hb_088916_010 0.1076361257 - - PREDICTED: receptor-like serine/threonine-protein kinase At4g25390 [Jatropha curcas]
7 Hb_001864_010 0.1091175276 - - conserved hypothetical protein [Ricinus communis]
8 Hb_007894_260 0.1115877151 - - receptor protein kinase, putative [Ricinus communis]
9 Hb_000221_170 0.1164756969 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
10 Hb_012395_070 0.1205496786 - - PREDICTED: probable metal-nicotianamine transporter YSL6 [Jatropha curcas]
11 Hb_001104_280 0.1218893685 - - PREDICTED: UPF0481 protein At3g47200 [Jatropha curcas]
12 Hb_006569_110 0.1223807588 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004574_010 0.1226616556 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
14 Hb_006938_010 0.1236190756 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
15 Hb_000684_020 0.1287238958 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
16 Hb_000381_030 0.1324852519 - - PREDICTED: aquaporin SIP1-1-like [Jatropha curcas]
17 Hb_000876_050 0.1324969664 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
18 Hb_006326_030 0.1343188132 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000740_130 0.1356233057 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
20 Hb_002007_230 0.1389990352 - - PREDICTED: probable linoleate 9S-lipoxygenase 5 [Jatropha curcas]

Gene co-expression network

sample Hb_000920_360 Hb_000920_360 Hb_000286_190 Hb_000286_190 Hb_000920_360--Hb_000286_190 Hb_005797_030 Hb_005797_030 Hb_000920_360--Hb_005797_030 Hb_029508_030 Hb_029508_030 Hb_000920_360--Hb_029508_030 Hb_000608_450 Hb_000608_450 Hb_000920_360--Hb_000608_450 Hb_088916_010 Hb_088916_010 Hb_000920_360--Hb_088916_010 Hb_001864_010 Hb_001864_010 Hb_000920_360--Hb_001864_010 Hb_000286_190--Hb_029508_030 Hb_000286_190--Hb_005797_030 Hb_000286_190--Hb_001864_010 Hb_004574_010 Hb_004574_010 Hb_000286_190--Hb_004574_010 Hb_000286_190--Hb_000608_450 Hb_005797_030--Hb_001864_010 Hb_002007_230 Hb_002007_230 Hb_005797_030--Hb_002007_230 Hb_001104_280 Hb_001104_280 Hb_005797_030--Hb_001104_280 Hb_003086_200 Hb_003086_200 Hb_005797_030--Hb_003086_200 Hb_000221_170 Hb_000221_170 Hb_029508_030--Hb_000221_170 Hb_029508_030--Hb_001864_010 Hb_001709_070 Hb_001709_070 Hb_029508_030--Hb_001709_070 Hb_000876_050 Hb_000876_050 Hb_029508_030--Hb_000876_050 Hb_108884_020 Hb_108884_020 Hb_000608_450--Hb_108884_020 Hb_010926_030 Hb_010926_030 Hb_000608_450--Hb_010926_030 Hb_009510_060 Hb_009510_060 Hb_000608_450--Hb_009510_060 Hb_000608_450--Hb_005797_030 Hb_001838_050 Hb_001838_050 Hb_088916_010--Hb_001838_050 Hb_008140_060 Hb_008140_060 Hb_088916_010--Hb_008140_060 Hb_000740_130 Hb_000740_130 Hb_088916_010--Hb_000740_130 Hb_001105_200 Hb_001105_200 Hb_088916_010--Hb_001105_200 Hb_182021_010 Hb_182021_010 Hb_088916_010--Hb_182021_010 Hb_001864_010--Hb_002007_230 Hb_001864_010--Hb_000221_170 Hb_008503_020 Hb_008503_020 Hb_001864_010--Hb_008503_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.247742 0.0152213 0.0502845 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.470516 0.0752698

CAGE analysis