Hb_000922_010

Information

Type -
Description -
Location Contig922: 18202-20823
Sequence    

Annotation

kegg
ID pop:POPTR_0015s08590g
description POPTRDRAFT_666455; hypothetical protein
nr
ID KDP31112.1
description hypothetical protein JCGZ_11488 [Jatropha curcas]
swissprot
ID O64411
description Polyamine oxidase OS=Zea mays GN=PAO PE=1 SV=1
trembl
ID A0A067K4P3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11488 PE=4 SV=1
Gene Ontology
ID GO:0046592
description polyamine oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000922_010 0.0 - - hypothetical protein JCGZ_11488 [Jatropha curcas]
2 Hb_005152_010 0.1711158904 - - hypothetical protein JCGZ_22048 [Jatropha curcas]
3 Hb_001004_100 0.1829835696 - - ATP binding protein, putative [Ricinus communis]
4 Hb_158092_060 0.1932061765 - - aspartate semialdehyde dehydrogenase, putative [Ricinus communis]
5 Hb_000471_080 0.1944336889 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
6 Hb_001123_010 0.1977005802 - - conserved hypothetical protein [Ricinus communis]
7 Hb_030982_060 0.1990145954 - - conserved hypothetical protein [Ricinus communis]
8 Hb_009545_010 0.2123199767 transcription factor TF Family: GNAT Acetyltransferase [Medicago truncatula]
9 Hb_000653_010 0.2147520118 - - hypothetical protein CICLE_v10033238mg [Citrus clementina]
10 Hb_007545_140 0.2168222493 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105141503 [Populus euphratica]
11 Hb_002849_150 0.2177143768 - - hypothetical protein JCGZ_14367 [Jatropha curcas]
12 Hb_022276_020 0.2247389424 - - -
13 Hb_121461_020 0.2319267132 - - o-methyltransferase, putative [Ricinus communis]
14 Hb_008226_020 0.2333324359 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
15 Hb_006275_010 0.2349835884 - - PREDICTED: ribulose bisphosphate carboxylase small chain clone 512-like [Jatropha curcas]
16 Hb_002471_260 0.2387730027 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105634154 [Jatropha curcas]
17 Hb_006141_030 0.2402979718 - - -
18 Hb_002835_350 0.2414218734 - - PREDICTED: uncharacterized protein LOC105640319 [Jatropha curcas]
19 Hb_000138_020 0.2417291628 - - PREDICTED: peroxidase A2-like [Jatropha curcas]
20 Hb_007943_160 0.2417724837 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]

Gene co-expression network

sample Hb_000922_010 Hb_000922_010 Hb_005152_010 Hb_005152_010 Hb_000922_010--Hb_005152_010 Hb_001004_100 Hb_001004_100 Hb_000922_010--Hb_001004_100 Hb_158092_060 Hb_158092_060 Hb_000922_010--Hb_158092_060 Hb_000471_080 Hb_000471_080 Hb_000922_010--Hb_000471_080 Hb_001123_010 Hb_001123_010 Hb_000922_010--Hb_001123_010 Hb_030982_060 Hb_030982_060 Hb_000922_010--Hb_030982_060 Hb_007545_140 Hb_007545_140 Hb_005152_010--Hb_007545_140 Hb_002597_010 Hb_002597_010 Hb_005152_010--Hb_002597_010 Hb_064122_010 Hb_064122_010 Hb_005152_010--Hb_064122_010 Hb_005152_010--Hb_030982_060 Hb_002471_260 Hb_002471_260 Hb_005152_010--Hb_002471_260 Hb_001004_100--Hb_001123_010 Hb_012753_190 Hb_012753_190 Hb_001004_100--Hb_012753_190 Hb_001004_100--Hb_158092_060 Hb_029904_010 Hb_029904_010 Hb_001004_100--Hb_029904_010 Hb_002849_150 Hb_002849_150 Hb_001004_100--Hb_002849_150 Hb_000653_010 Hb_000653_010 Hb_001004_100--Hb_000653_010 Hb_000675_060 Hb_000675_060 Hb_158092_060--Hb_000675_060 Hb_158092_060--Hb_000471_080 Hb_009545_010 Hb_009545_010 Hb_158092_060--Hb_009545_010 Hb_158092_060--Hb_002471_260 Hb_029510_110 Hb_029510_110 Hb_000471_080--Hb_029510_110 Hb_000614_180 Hb_000614_180 Hb_000471_080--Hb_000614_180 Hb_001366_250 Hb_001366_250 Hb_000471_080--Hb_001366_250 Hb_005000_310 Hb_005000_310 Hb_000471_080--Hb_005000_310 Hb_000140_190 Hb_000140_190 Hb_000471_080--Hb_000140_190 Hb_000138_020 Hb_000138_020 Hb_001123_010--Hb_000138_020 Hb_006141_030 Hb_006141_030 Hb_001123_010--Hb_006141_030 Hb_000453_240 Hb_000453_240 Hb_001123_010--Hb_000453_240 Hb_002026_080 Hb_002026_080 Hb_001123_010--Hb_002026_080 Hb_001123_010--Hb_012753_190 Hb_011947_020 Hb_011947_020 Hb_030982_060--Hb_011947_020 Hb_032225_030 Hb_032225_030 Hb_030982_060--Hb_032225_030 Hb_001439_110 Hb_001439_110 Hb_030982_060--Hb_001439_110 Hb_003592_030 Hb_003592_030 Hb_030982_060--Hb_003592_030 Hb_000189_590 Hb_000189_590 Hb_030982_060--Hb_000189_590
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.5522 1.59685 1.14705 13.7756 0.0622994 0.0526277
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.78502 1.29925 4.91657 38.0877 3.80202

CAGE analysis