Hb_000922_060

Information

Type -
Description -
Location Contig922: 84198-88264
Sequence    

Annotation

kegg
ID rcu:RCOM_1510760
description kinesin light chain, putative
nr
ID XP_002511407.1
description kinesin light chain, putative [Ricinus communis]
swissprot
ID Q7Z494
description Nephrocystin-3 OS=Homo sapiens GN=NPHP3 PE=1 SV=1
trembl
ID B9RB32
description Kinesin light chain, putative OS=Ricinus communis GN=RCOM_1510760 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62481: 84444-88118
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000922_060 0.0 - - kinesin light chain, putative [Ricinus communis]
2 Hb_003682_070 0.0671361431 - - PREDICTED: uncharacterized protein LOC105633817 isoform X1 [Jatropha curcas]
3 Hb_000000_310 0.0832653569 - - metalloendopeptidase, putative [Ricinus communis]
4 Hb_005192_010 0.0859832059 - - PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]
5 Hb_183086_030 0.0877084965 - - GTPase-activating protein GYP7 [Gossypium arboreum]
6 Hb_000300_510 0.0885941183 - - PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
7 Hb_022250_010 0.0949975432 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Jatropha curcas]
8 Hb_002053_050 0.096175891 - - Kinesin heavy chain, putative [Ricinus communis]
9 Hb_001029_040 0.1005885781 - - PREDICTED: uncharacterized protein LOC105641058 [Jatropha curcas]
10 Hb_001882_020 0.100589039 - - PREDICTED: uncharacterized protein LOC105628417 [Jatropha curcas]
11 Hb_004994_350 0.1006072333 - - PREDICTED: UPF0187 protein At3g61320, chloroplastic [Jatropha curcas]
12 Hb_000107_250 0.1006946335 - - voltage-gated clc-type chloride channel, putative [Ricinus communis]
13 Hb_024184_010 0.1018404361 - - PREDICTED: clustered mitochondria protein-like isoform X1 [Citrus sinensis]
14 Hb_001421_090 0.1022892111 - - hypothetical protein RCOM_1278080 [Ricinus communis]
15 Hb_003125_220 0.1037704466 - - PREDICTED: CBS domain-containing protein CBSCBSPB1 [Jatropha curcas]
16 Hb_003462_060 0.104578292 - - PREDICTED: ABC transporter G family member 24-like [Jatropha curcas]
17 Hb_008014_040 0.1050318331 - - PREDICTED: uncharacterized protein LOC105649721 [Jatropha curcas]
18 Hb_033642_060 0.1050499613 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
19 Hb_000140_340 0.1099114912 - - PREDICTED: protein ABIL1 [Jatropha curcas]
20 Hb_027445_030 0.1100365671 - - F-box/LRR-repeat protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000922_060 Hb_000922_060 Hb_003682_070 Hb_003682_070 Hb_000922_060--Hb_003682_070 Hb_000000_310 Hb_000000_310 Hb_000922_060--Hb_000000_310 Hb_005192_010 Hb_005192_010 Hb_000922_060--Hb_005192_010 Hb_183086_030 Hb_183086_030 Hb_000922_060--Hb_183086_030 Hb_000300_510 Hb_000300_510 Hb_000922_060--Hb_000300_510 Hb_022250_010 Hb_022250_010 Hb_000922_060--Hb_022250_010 Hb_003682_070--Hb_000000_310 Hb_003682_070--Hb_000300_510 Hb_000107_250 Hb_000107_250 Hb_003682_070--Hb_000107_250 Hb_000120_860 Hb_000120_860 Hb_003682_070--Hb_000120_860 Hb_004735_020 Hb_004735_020 Hb_003682_070--Hb_004735_020 Hb_000000_310--Hb_000107_250 Hb_000000_310--Hb_000300_510 Hb_000684_390 Hb_000684_390 Hb_000000_310--Hb_000684_390 Hb_000000_310--Hb_000120_860 Hb_003975_010 Hb_003975_010 Hb_005192_010--Hb_003975_010 Hb_001029_040 Hb_001029_040 Hb_005192_010--Hb_001029_040 Hb_003746_010 Hb_003746_010 Hb_005192_010--Hb_003746_010 Hb_005192_010--Hb_000300_510 Hb_001754_020 Hb_001754_020 Hb_005192_010--Hb_001754_020 Hb_033642_060 Hb_033642_060 Hb_183086_030--Hb_033642_060 Hb_183086_030--Hb_022250_010 Hb_001801_020 Hb_001801_020 Hb_183086_030--Hb_001801_020 Hb_000359_190 Hb_000359_190 Hb_183086_030--Hb_000359_190 Hb_001246_130 Hb_001246_130 Hb_183086_030--Hb_001246_130 Hb_001421_090 Hb_001421_090 Hb_000300_510--Hb_001421_090 Hb_000300_510--Hb_000684_390 Hb_001876_040 Hb_001876_040 Hb_022250_010--Hb_001876_040 Hb_001157_230 Hb_001157_230 Hb_022250_010--Hb_001157_230 Hb_001541_150 Hb_001541_150 Hb_022250_010--Hb_001541_150 Hb_022250_010--Hb_001029_040 Hb_000270_190 Hb_000270_190 Hb_022250_010--Hb_000270_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.5024 18.6431 19.1337 30.9912 8.71201 11.8424
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.12669 4.32828 7.87663 7.59217 31.5666

CAGE analysis