Hb_000922_140

Information

Type -
Description -
Location Contig922: 155355-161805
Sequence    

Annotation

kegg
ID rcu:RCOM_1510590
description hypothetical protein
nr
ID XP_012080068.1
description PREDICTED: peroxisomal membrane protein PEX14 [Jatropha curcas]
swissprot
ID Q9FXT6
description Peroxisomal membrane protein PEX14 OS=Arabidopsis thaliana GN=PEX14 PE=1 SV=2
trembl
ID A0A067K4F4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11477 PE=4 SV=1
Gene Ontology
ID GO:0005778
description peroxisomal membrane protein pex14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62486: 155756-161335 , PASA_asmbl_62487: 155535-156097
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000922_140 0.0 - - PREDICTED: peroxisomal membrane protein PEX14 [Jatropha curcas]
2 Hb_001953_150 0.0636965035 - - PREDICTED: protein DEK isoform X2 [Jatropha curcas]
3 Hb_005332_020 0.0771536631 transcription factor TF Family: SNF2 dead box ATP-dependent RNA helicase, putative [Ricinus communis]
4 Hb_006658_040 0.0789930534 - - hypothetical protein POPTR_0006s19640g [Populus trichocarpa]
5 Hb_004429_160 0.079457887 - - PREDICTED: serine/threonine-protein kinase TAO3 isoform X1 [Jatropha curcas]
6 Hb_001427_190 0.0816327809 - - PREDICTED: histone acetyltransferase type B catalytic subunit [Jatropha curcas]
7 Hb_001307_080 0.0826816481 - - PREDICTED: phospholipid--sterol O-acyltransferase [Jatropha curcas]
8 Hb_001900_120 0.0879368635 - - PREDICTED: uncharacterized protein LOC105632666 [Jatropha curcas]
9 Hb_028872_120 0.089963398 - - PREDICTED: cyclin-dependent kinase G-2 [Jatropha curcas]
10 Hb_000963_130 0.0908966999 - - RNA m5u methyltransferase, putative [Ricinus communis]
11 Hb_010315_090 0.0926093949 - - suppressor of ty, putative [Ricinus communis]
12 Hb_007558_120 0.0927233991 transcription factor TF Family: IWS1 transcription elongation factor s-II, putative [Ricinus communis]
13 Hb_003739_030 0.0927976791 - - PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Jatropha curcas]
14 Hb_001143_250 0.0938808385 - - PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Jatropha curcas]
15 Hb_007929_080 0.0943119387 - - PREDICTED: transforming growth factor-beta receptor-associated protein 1 [Jatropha curcas]
16 Hb_008103_080 0.0950246245 - - PREDICTED: lycopene epsilon cyclase, chloroplastic [Jatropha curcas]
17 Hb_017895_020 0.0950793702 - - Vacuolar protein sorting protein, putative [Ricinus communis]
18 Hb_002422_050 0.0951114433 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 5 isoform X1 [Jatropha curcas]
19 Hb_002092_100 0.0953735628 - - PREDICTED: actin-related protein 4-like [Jatropha curcas]
20 Hb_002078_100 0.0961581169 - - PREDICTED: mannosyl-oligosaccharide glucosidase GCS1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000922_140 Hb_000922_140 Hb_001953_150 Hb_001953_150 Hb_000922_140--Hb_001953_150 Hb_005332_020 Hb_005332_020 Hb_000922_140--Hb_005332_020 Hb_006658_040 Hb_006658_040 Hb_000922_140--Hb_006658_040 Hb_004429_160 Hb_004429_160 Hb_000922_140--Hb_004429_160 Hb_001427_190 Hb_001427_190 Hb_000922_140--Hb_001427_190 Hb_001307_080 Hb_001307_080 Hb_000922_140--Hb_001307_080 Hb_001953_150--Hb_005332_020 Hb_080147_040 Hb_080147_040 Hb_001953_150--Hb_080147_040 Hb_001799_050 Hb_001799_050 Hb_001953_150--Hb_001799_050 Hb_001143_250 Hb_001143_250 Hb_001953_150--Hb_001143_250 Hb_000270_460 Hb_000270_460 Hb_001953_150--Hb_000270_460 Hb_002422_050 Hb_002422_050 Hb_005332_020--Hb_002422_050 Hb_008887_020 Hb_008887_020 Hb_005332_020--Hb_008887_020 Hb_000152_260 Hb_000152_260 Hb_005332_020--Hb_000152_260 Hb_005332_020--Hb_001143_250 Hb_002374_260 Hb_002374_260 Hb_005332_020--Hb_002374_260 Hb_006658_040--Hb_001307_080 Hb_000160_350 Hb_000160_350 Hb_006658_040--Hb_000160_350 Hb_002157_260 Hb_002157_260 Hb_006658_040--Hb_002157_260 Hb_002045_150 Hb_002045_150 Hb_006658_040--Hb_002045_150 Hb_005965_030 Hb_005965_030 Hb_006658_040--Hb_005965_030 Hb_000191_130 Hb_000191_130 Hb_004429_160--Hb_000191_130 Hb_003040_020 Hb_003040_020 Hb_004429_160--Hb_003040_020 Hb_000032_010 Hb_000032_010 Hb_004429_160--Hb_000032_010 Hb_004429_160--Hb_001307_080 Hb_000062_470 Hb_000062_470 Hb_004429_160--Hb_000062_470 Hb_000935_090 Hb_000935_090 Hb_004429_160--Hb_000935_090 Hb_011930_080 Hb_011930_080 Hb_001427_190--Hb_011930_080 Hb_001935_110 Hb_001935_110 Hb_001427_190--Hb_001935_110 Hb_001427_190--Hb_000152_260 Hb_019654_040 Hb_019654_040 Hb_001427_190--Hb_019654_040 Hb_002078_100 Hb_002078_100 Hb_001427_190--Hb_002078_100 Hb_002888_070 Hb_002888_070 Hb_001427_190--Hb_002888_070 Hb_001307_080--Hb_000191_130 Hb_000010_360 Hb_000010_360 Hb_001307_080--Hb_000010_360 Hb_004209_020 Hb_004209_020 Hb_001307_080--Hb_004209_020 Hb_001307_080--Hb_003040_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
57.6603 35.8821 37.613 17.2133 52.8661 41.8207
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.6525 10.7438 14.7313 32.5485 30.1298

CAGE analysis