Hb_000922_350

Information

Type -
Description -
Location Contig922: 291545-293310
Sequence    

Annotation

kegg
ID pop:POPTR_0015s08930g
description POPTRDRAFT_776100; hypothetical protein
nr
ID XP_012080046.1
description PREDICTED: uncharacterized protein LOC105640367 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGW6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11460 PE=4 SV=1
Gene Ontology
ID GO:0016740
description udp-n-acetylglucosamine--n-acetylmuramyl- pyrophosphoryl-undecaprenol n-acetylglucosamine transferase isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62508: 290706-290871 , PASA_asmbl_62509: 290903-291321
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000922_350 0.0 - - PREDICTED: uncharacterized protein LOC105640367 [Jatropha curcas]
2 Hb_000069_690 0.0690068598 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF6 [Jatropha curcas]
3 Hb_000659_040 0.1289204776 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
4 Hb_003494_220 0.1346407618 - - PREDICTED: uncharacterized protein LOC105644073 [Jatropha curcas]
5 Hb_000252_260 0.1376657291 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
6 Hb_004241_110 0.1440344834 - - Minor allergen Alt a, putative [Ricinus communis]
7 Hb_000160_250 0.1501474796 - - Uncharacterized protein TCM_019235 [Theobroma cacao]
8 Hb_001008_080 0.150435525 - - PREDICTED: acyl-protein thioesterase 2 [Jatropha curcas]
9 Hb_003266_090 0.1509841614 - - PREDICTED: basic 7S globulin 2-like [Jatropha curcas]
10 Hb_000856_200 0.1547456305 - - ATPase 4, plasma membrane-type -like protein [Gossypium arboreum]
11 Hb_006570_060 0.1593306127 - - PREDICTED: uncharacterized protein LOC105635332 [Jatropha curcas]
12 Hb_001318_100 0.1600075904 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
13 Hb_028227_040 0.1602123679 - - PREDICTED: uncharacterized protein LOC105645005 [Jatropha curcas]
14 Hb_000272_030 0.1608002962 - - PREDICTED: WD repeat-containing protein 76 isoform X1 [Jatropha curcas]
15 Hb_007894_070 0.1638968053 - - PREDICTED: uncharacterized protein LOC105632955 [Jatropha curcas]
16 Hb_001213_030 0.1646750279 - - PAR1 protein [Theobroma cacao]
17 Hb_020378_020 0.1648849821 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
18 Hb_003581_050 0.1652105498 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-54 [Jatropha curcas]
19 Hb_000941_090 0.1658754154 - - PREDICTED: protein trichome birefringence [Jatropha curcas]
20 Hb_010557_020 0.1664332534 - - Mlo protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_000922_350 Hb_000922_350 Hb_000069_690 Hb_000069_690 Hb_000922_350--Hb_000069_690 Hb_000659_040 Hb_000659_040 Hb_000922_350--Hb_000659_040 Hb_003494_220 Hb_003494_220 Hb_000922_350--Hb_003494_220 Hb_000252_260 Hb_000252_260 Hb_000922_350--Hb_000252_260 Hb_004241_110 Hb_004241_110 Hb_000922_350--Hb_004241_110 Hb_000160_250 Hb_000160_250 Hb_000922_350--Hb_000160_250 Hb_000069_690--Hb_000252_260 Hb_000069_690--Hb_000659_040 Hb_000272_030 Hb_000272_030 Hb_000069_690--Hb_000272_030 Hb_000326_080 Hb_000326_080 Hb_000069_690--Hb_000326_080 Hb_000856_200 Hb_000856_200 Hb_000069_690--Hb_000856_200 Hb_003147_040 Hb_003147_040 Hb_000659_040--Hb_003147_040 Hb_000363_250 Hb_000363_250 Hb_000659_040--Hb_000363_250 Hb_000659_040--Hb_000272_030 Hb_001318_100 Hb_001318_100 Hb_000659_040--Hb_001318_100 Hb_000659_040--Hb_000856_200 Hb_007894_070 Hb_007894_070 Hb_000659_040--Hb_007894_070 Hb_000473_100 Hb_000473_100 Hb_003494_220--Hb_000473_100 Hb_010557_020 Hb_010557_020 Hb_003494_220--Hb_010557_020 Hb_002284_060 Hb_002284_060 Hb_003494_220--Hb_002284_060 Hb_000290_030 Hb_000290_030 Hb_003494_220--Hb_000290_030 Hb_001268_150 Hb_001268_150 Hb_003494_220--Hb_001268_150 Hb_000069_540 Hb_000069_540 Hb_003494_220--Hb_000069_540 Hb_000252_260--Hb_000326_080 Hb_000252_260--Hb_000272_030 Hb_031862_120 Hb_031862_120 Hb_000252_260--Hb_031862_120 Hb_001951_230 Hb_001951_230 Hb_000252_260--Hb_001951_230 Hb_000252_260--Hb_000659_040 Hb_084147_010 Hb_084147_010 Hb_004241_110--Hb_084147_010 Hb_012395_110 Hb_012395_110 Hb_004241_110--Hb_012395_110 Hb_003001_130 Hb_003001_130 Hb_004241_110--Hb_003001_130 Hb_004241_110--Hb_007894_070 Hb_000227_280 Hb_000227_280 Hb_004241_110--Hb_000227_280 Hb_004241_110--Hb_001318_100 Hb_000160_250--Hb_001268_150 Hb_000160_250--Hb_000290_030 Hb_002942_200 Hb_002942_200 Hb_000160_250--Hb_002942_200 Hb_008221_200 Hb_008221_200 Hb_000160_250--Hb_008221_200 Hb_004696_010 Hb_004696_010 Hb_000160_250--Hb_004696_010 Hb_000718_060 Hb_000718_060 Hb_000160_250--Hb_000718_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.928297 0.922625 2.07587 0.0222243 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.152218 0.119719 0 0.288874 1.63265

CAGE analysis