Hb_000925_150

Information

Type -
Description -
Location Contig925: 162510-164892
Sequence    

Annotation

kegg
ID rcu:RCOM_0322400
description hypothetical protein
nr
ID XP_012074319.1
description PREDICTED: aluminum-activated malate transporter 8-like [Jatropha curcas]
swissprot
ID Q9SRM9
description Aluminum-activated malate transporter 8 OS=Arabidopsis thaliana GN=ALMT8 PE=3 SV=1
trembl
ID A0A067KW92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08758 PE=4 SV=1
Gene Ontology
ID GO:0015743
description aluminum-activated malate transporter 8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000925_150 0.0 - - PREDICTED: aluminum-activated malate transporter 8-like [Jatropha curcas]
2 Hb_018133_070 0.1287895235 - - PREDICTED: RING-H2 finger protein ATL43 [Jatropha curcas]
3 Hb_002374_470 0.1387238278 - - PREDICTED: filament-like plant protein isoform X2 [Jatropha curcas]
4 Hb_012055_080 0.1391363866 - - PREDICTED: lysine-rich arabinogalactan protein 18-like [Jatropha curcas]
5 Hb_005890_020 0.1415198489 - - putative plant disease resistance family protein [Populus trichocarpa]
6 Hb_004115_010 0.1427776125 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG11 [Jatropha curcas]
7 Hb_011033_010 0.1494534207 - - ATP-binding cassette transporter, putative [Ricinus communis]
8 Hb_000932_110 0.1514551132 - - Root phototropism protein, putative [Ricinus communis]
9 Hb_002301_120 0.1533082357 - - PREDICTED: uncharacterized protein LOC105649581 [Jatropha curcas]
10 Hb_000438_160 0.1551332332 - - conserved hypothetical protein [Ricinus communis]
11 Hb_059567_010 0.1558862294 - - PREDICTED: transcription factor PAR2-like [Jatropha curcas]
12 Hb_003581_230 0.1572662316 - - PREDICTED: LOW QUALITY PROTEIN: SNF1-related protein kinase regulatory subunit gamma-1-like [Jatropha curcas]
13 Hb_000056_030 0.157799042 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390 isoform X1 [Jatropha curcas]
14 Hb_010683_030 0.1580086755 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000017_200 0.1625044512 - - PREDICTED: uncharacterized protein LOC105645766 [Jatropha curcas]
16 Hb_000120_930 0.1640812418 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
17 Hb_007952_050 0.1655194043 - - PREDICTED: 125 kDa kinesin-related protein-like [Jatropha curcas]
18 Hb_001511_210 0.1663943578 - - PREDICTED: protein ESKIMO 1-like [Jatropha curcas]
19 Hb_004143_090 0.1671073372 - - PREDICTED: VIN3-like protein 2 isoform X1 [Jatropha curcas]
20 Hb_165101_010 0.1680610624 - - PREDICTED: putative wall-associated receptor kinase-like 16 [Nelumbo nucifera]

Gene co-expression network

sample Hb_000925_150 Hb_000925_150 Hb_018133_070 Hb_018133_070 Hb_000925_150--Hb_018133_070 Hb_002374_470 Hb_002374_470 Hb_000925_150--Hb_002374_470 Hb_012055_080 Hb_012055_080 Hb_000925_150--Hb_012055_080 Hb_005890_020 Hb_005890_020 Hb_000925_150--Hb_005890_020 Hb_004115_010 Hb_004115_010 Hb_000925_150--Hb_004115_010 Hb_011033_010 Hb_011033_010 Hb_000925_150--Hb_011033_010 Hb_006133_020 Hb_006133_020 Hb_018133_070--Hb_006133_020 Hb_010683_030 Hb_010683_030 Hb_018133_070--Hb_010683_030 Hb_000032_360 Hb_000032_360 Hb_018133_070--Hb_000032_360 Hb_003020_190 Hb_003020_190 Hb_018133_070--Hb_003020_190 Hb_047659_010 Hb_047659_010 Hb_018133_070--Hb_047659_010 Hb_001511_210 Hb_001511_210 Hb_002374_470--Hb_001511_210 Hb_011671_050 Hb_011671_050 Hb_002374_470--Hb_011671_050 Hb_027684_010 Hb_027684_010 Hb_002374_470--Hb_027684_010 Hb_019613_030 Hb_019613_030 Hb_002374_470--Hb_019613_030 Hb_002066_100 Hb_002066_100 Hb_002374_470--Hb_002066_100 Hb_002518_040 Hb_002518_040 Hb_002374_470--Hb_002518_040 Hb_003935_090 Hb_003935_090 Hb_012055_080--Hb_003935_090 Hb_007952_050 Hb_007952_050 Hb_012055_080--Hb_007952_050 Hb_012055_080--Hb_011033_010 Hb_007574_020 Hb_007574_020 Hb_012055_080--Hb_007574_020 Hb_004218_050 Hb_004218_050 Hb_012055_080--Hb_004218_050 Hb_005496_040 Hb_005496_040 Hb_005890_020--Hb_005496_040 Hb_001080_190 Hb_001080_190 Hb_005890_020--Hb_001080_190 Hb_002301_400 Hb_002301_400 Hb_005890_020--Hb_002301_400 Hb_001439_080 Hb_001439_080 Hb_005890_020--Hb_001439_080 Hb_017383_010 Hb_017383_010 Hb_005890_020--Hb_017383_010 Hb_000103_220 Hb_000103_220 Hb_005890_020--Hb_000103_220 Hb_019973_010 Hb_019973_010 Hb_004115_010--Hb_019973_010 Hb_000120_340 Hb_000120_340 Hb_004115_010--Hb_000120_340 Hb_007313_030 Hb_007313_030 Hb_004115_010--Hb_007313_030 Hb_000086_470 Hb_000086_470 Hb_004115_010--Hb_000086_470 Hb_004115_010--Hb_002518_040 Hb_004115_010--Hb_005890_020 Hb_010288_030 Hb_010288_030 Hb_011033_010--Hb_010288_030 Hb_071674_010 Hb_071674_010 Hb_011033_010--Hb_071674_010 Hb_000061_430 Hb_000061_430 Hb_011033_010--Hb_000061_430 Hb_011033_010--Hb_005890_020 Hb_011033_010--Hb_018133_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0139632 0.0115622 0.585359 0.325424 0.0392314 0.0280605
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0299791 0.20931

CAGE analysis