Hb_000926_090

Information

Type -
Description -
Location Contig926: 104228-111158
Sequence    

Annotation

kegg
ID rcu:RCOM_1303600
description dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase, putative (EC:2.3.1.61)
nr
ID XP_012070861.1
description PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like [Jatropha curcas]
swissprot
ID Q8H107
description Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial OS=Arabidopsis thaliana GN=At4g26910 PE=2 SV=2
trembl
ID A0A067L3S8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00912 PE=3 SV=1
Gene Ontology
ID GO:0045252
description dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62658: 104277-111177 , PASA_asmbl_62659: 104408-104598
cDNA
(Sanger)
(ID:Location)		 010_M06.ab1: 104277-107742

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000926_090 0.0 - - PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like [Jatropha curcas]
2 Hb_002754_010 0.0621512538 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
3 Hb_022256_020 0.0699615876 - - PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Jatropha curcas]
4 Hb_007317_010 0.0715685968 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000484_130 0.0719062184 - - splicing factor, putative [Ricinus communis]
6 Hb_164010_040 0.0750955912 - - serine/threonine protein kinase, putative [Ricinus communis]
7 Hb_022250_060 0.0752038788 - - PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like isoform X1 [Jatropha curcas]
8 Hb_000331_550 0.0756369662 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 67 [Jatropha curcas]
9 Hb_000300_500 0.0757835989 - - PREDICTED: uncharacterized protein LOC105632604 [Jatropha curcas]
10 Hb_004117_260 0.0758505366 - - conserved hypothetical protein [Ricinus communis]
11 Hb_008725_230 0.0771408484 - - PREDICTED: CTP synthase [Jatropha curcas]
12 Hb_001473_160 0.0773051716 - - Vesicle-associated membrane protein, putative [Ricinus communis]
13 Hb_000393_020 0.0798393659 - - lipid binding protein, putative [Ricinus communis]
14 Hb_000349_260 0.0799165699 - - PREDICTED: transmembrane protein 64 [Jatropha curcas]
15 Hb_001300_150 0.0801964998 transcription factor TF Family: TUB PREDICTED: tubby-like F-box protein 3 [Jatropha curcas]
16 Hb_003304_020 0.0805628535 - - Polyadenylate-binding protein RBP47C [Glycine soja]
17 Hb_000049_210 0.0825176907 - - PREDICTED: uncharacterized protein LOC105644460 [Jatropha curcas]
18 Hb_000637_110 0.0827047265 - - hypothetical protein B456_013G081300 [Gossypium raimondii]
19 Hb_000028_180 0.0831862476 - - PREDICTED: probable serine/threonine protein kinase IREH1 isoform X2 [Jatropha curcas]
20 Hb_001359_050 0.0845076059 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000926_090 Hb_000926_090 Hb_002754_010 Hb_002754_010 Hb_000926_090--Hb_002754_010 Hb_022256_020 Hb_022256_020 Hb_000926_090--Hb_022256_020 Hb_007317_010 Hb_007317_010 Hb_000926_090--Hb_007317_010 Hb_000484_130 Hb_000484_130 Hb_000926_090--Hb_000484_130 Hb_164010_040 Hb_164010_040 Hb_000926_090--Hb_164010_040 Hb_022250_060 Hb_022250_060 Hb_000926_090--Hb_022250_060 Hb_002754_010--Hb_164010_040 Hb_000331_550 Hb_000331_550 Hb_002754_010--Hb_000331_550 Hb_065525_040 Hb_065525_040 Hb_002754_010--Hb_065525_040 Hb_013358_040 Hb_013358_040 Hb_002754_010--Hb_013358_040 Hb_001300_150 Hb_001300_150 Hb_002754_010--Hb_001300_150 Hb_022256_020--Hb_000484_130 Hb_002675_130 Hb_002675_130 Hb_022256_020--Hb_002675_130 Hb_002234_090 Hb_002234_090 Hb_022256_020--Hb_002234_090 Hb_004916_010 Hb_004916_010 Hb_022256_020--Hb_004916_010 Hb_033772_030 Hb_033772_030 Hb_022256_020--Hb_033772_030 Hb_002818_030 Hb_002818_030 Hb_022256_020--Hb_002818_030 Hb_007317_010--Hb_022250_060 Hb_002217_020 Hb_002217_020 Hb_007317_010--Hb_002217_020 Hb_000221_190 Hb_000221_190 Hb_007317_010--Hb_000221_190 Hb_010578_080 Hb_010578_080 Hb_007317_010--Hb_010578_080 Hb_007317_010--Hb_002754_010 Hb_001359_050 Hb_001359_050 Hb_000484_130--Hb_001359_050 Hb_003849_110 Hb_003849_110 Hb_000484_130--Hb_003849_110 Hb_012239_020 Hb_012239_020 Hb_000484_130--Hb_012239_020 Hb_001221_110 Hb_001221_110 Hb_000484_130--Hb_001221_110 Hb_003464_090 Hb_003464_090 Hb_000484_130--Hb_003464_090 Hb_000869_080 Hb_000869_080 Hb_164010_040--Hb_000869_080 Hb_062226_130 Hb_062226_130 Hb_164010_040--Hb_062226_130 Hb_164010_040--Hb_013358_040 Hb_001278_100 Hb_001278_100 Hb_164010_040--Hb_001278_100 Hb_002073_200 Hb_002073_200 Hb_164010_040--Hb_002073_200 Hb_022250_060--Hb_000221_190 Hb_004162_130 Hb_004162_130 Hb_022250_060--Hb_004162_130 Hb_022250_060--Hb_002217_020 Hb_000393_020 Hb_000393_020 Hb_022250_060--Hb_000393_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
37.0184 43.3588 46.409 42.0172 23.5185 35.6422
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.2879 44.454 60.8619 42.0221 26.7584

CAGE analysis