Hb_000926_220

Information

Type -
Description -
Location Contig926: 241410-245034
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000926_220 0.0 - - -
2 Hb_017836_010 0.0113000252 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
3 Hb_095413_040 0.081248346 - - -
4 Hb_003607_030 0.095938322 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor ABI3 [Jatropha curcas]
5 Hb_009693_040 0.1064990774 - - PREDICTED: serine/threonine-protein kinase At3g07070 [Brassica rapa]
6 Hb_007963_050 0.1131600465 - - -
7 Hb_049438_010 0.1564886697 - - -
8 Hb_000953_150 0.1780401957 - - -
9 Hb_000098_280 0.1846001716 - - PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Jatropha curcas]
10 Hb_080765_020 0.1985986995 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
11 Hb_002498_200 0.2002040341 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
12 Hb_046727_010 0.2017339176 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
13 Hb_007008_020 0.2217962901 - - -
14 Hb_158990_010 0.2411965605 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
15 Hb_000100_050 0.246323446 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
16 Hb_004466_010 0.2468737602 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
17 Hb_011978_010 0.2470448088 - - hypothetical protein JCGZ_03852 [Jatropha curcas]
18 Hb_000375_380 0.2473955263 - - -
19 Hb_004324_380 0.2507856668 - - -
20 Hb_027393_020 0.2624360922 - - -

Gene co-expression network

sample Hb_000926_220 Hb_000926_220 Hb_017836_010 Hb_017836_010 Hb_000926_220--Hb_017836_010 Hb_095413_040 Hb_095413_040 Hb_000926_220--Hb_095413_040 Hb_003607_030 Hb_003607_030 Hb_000926_220--Hb_003607_030 Hb_009693_040 Hb_009693_040 Hb_000926_220--Hb_009693_040 Hb_007963_050 Hb_007963_050 Hb_000926_220--Hb_007963_050 Hb_049438_010 Hb_049438_010 Hb_000926_220--Hb_049438_010 Hb_017836_010--Hb_095413_040 Hb_017836_010--Hb_003607_030 Hb_017836_010--Hb_009693_040 Hb_017836_010--Hb_007963_050 Hb_017836_010--Hb_049438_010 Hb_095413_040--Hb_049438_010 Hb_002498_200 Hb_002498_200 Hb_095413_040--Hb_002498_200 Hb_095413_040--Hb_003607_030 Hb_095413_040--Hb_009693_040 Hb_003607_030--Hb_009693_040 Hb_003607_030--Hb_007963_050 Hb_000953_150 Hb_000953_150 Hb_003607_030--Hb_000953_150 Hb_000098_280 Hb_000098_280 Hb_003607_030--Hb_000098_280 Hb_080765_020 Hb_080765_020 Hb_003607_030--Hb_080765_020 Hb_009693_040--Hb_007963_050 Hb_009693_040--Hb_000953_150 Hb_009693_040--Hb_000098_280 Hb_009693_040--Hb_080765_020 Hb_046727_010 Hb_046727_010 Hb_009693_040--Hb_046727_010 Hb_007963_050--Hb_000953_150 Hb_007963_050--Hb_000098_280 Hb_007963_050--Hb_080765_020 Hb_007963_050--Hb_046727_010 Hb_049438_010--Hb_002498_200 Hb_000011_030 Hb_000011_030 Hb_049438_010--Hb_000011_030 Hb_000015_110 Hb_000015_110 Hb_049438_010--Hb_000015_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.119925 0 0 0 0.0319077 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis