Hb_000928_030

Information

Type transcription factor
Description TF Family: bZIP
Location Contig928: 15825-17502
Sequence    

Annotation

kegg
ID rcu:RCOM_0516810
description DNA binding protein, putative
nr
ID XP_012066490.1
description PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
swissprot
ID Q9SJN0
description Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1
trembl
ID A0A067L6C2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23678 PE=4 SV=1
Gene Ontology
ID GO:0005634
description protein abscisic acid-insensitive 5 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62742: 15838-16485
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000928_030 0.0 transcription factor TF Family: bZIP PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
2 Hb_000028_190 0.0612894758 - - PREDICTED: probable inactive receptor kinase At1g48480 [Jatropha curcas]
3 Hb_004137_040 0.0625555124 - - PREDICTED: serine carboxypeptidase-like 42 [Jatropha curcas]
4 Hb_052530_020 0.0651909273 - - cytochrome B5 isoform 1, putative [Ricinus communis]
5 Hb_002221_060 0.0690540219 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
6 Hb_000103_200 0.0724441551 - - calmodulin binding protein, putative [Ricinus communis]
7 Hb_000358_260 0.0730131454 - - PREDICTED: lachrymatory-factor synthase-like [Vitis vinifera]
8 Hb_012395_240 0.073433827 - - PREDICTED: uncharacterized protein LOC105638421 isoform X2 [Jatropha curcas]
9 Hb_000483_450 0.0756166876 - - PREDICTED: anthranilate N-benzoyltransferase protein 1 [Jatropha curcas]
10 Hb_002740_050 0.0766138535 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86-like [Populus euphratica]
11 Hb_000003_380 0.0795334261 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000230_300 0.0798954997 - - PREDICTED: S-adenosylmethionine decarboxylase proenzyme 4 [Jatropha curcas]
13 Hb_000915_170 0.0803262829 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
14 Hb_189208_070 0.0819643088 - - 10-deacetylbaccatin III 10-O-acetyltransferase, putative [Ricinus communis]
15 Hb_006816_380 0.0820610767 - - PREDICTED: kinesin-4-like [Jatropha curcas]
16 Hb_002119_100 0.0830716809 - - cytochrome B561, putative [Ricinus communis]
17 Hb_032920_020 0.0852601628 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
18 Hb_000538_090 0.0857878818 transcription factor TF Family: NAC hypothetical protein RCOM_1603380 [Ricinus communis]
19 Hb_000684_070 0.0867014753 - - PREDICTED: uncharacterized protein LOC105642198 isoform X1 [Jatropha curcas]
20 Hb_002150_090 0.088975284 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]

Gene co-expression network

sample Hb_000928_030 Hb_000928_030 Hb_000028_190 Hb_000028_190 Hb_000928_030--Hb_000028_190 Hb_004137_040 Hb_004137_040 Hb_000928_030--Hb_004137_040 Hb_052530_020 Hb_052530_020 Hb_000928_030--Hb_052530_020 Hb_002221_060 Hb_002221_060 Hb_000928_030--Hb_002221_060 Hb_000103_200 Hb_000103_200 Hb_000928_030--Hb_000103_200 Hb_000358_260 Hb_000358_260 Hb_000928_030--Hb_000358_260 Hb_000028_190--Hb_004137_040 Hb_002150_090 Hb_002150_090 Hb_000028_190--Hb_002150_090 Hb_000483_450 Hb_000483_450 Hb_000028_190--Hb_000483_450 Hb_001674_010 Hb_001674_010 Hb_000028_190--Hb_001674_010 Hb_008054_030 Hb_008054_030 Hb_000028_190--Hb_008054_030 Hb_004137_040--Hb_000483_450 Hb_004137_040--Hb_002221_060 Hb_000230_300 Hb_000230_300 Hb_004137_040--Hb_000230_300 Hb_004137_040--Hb_000103_200 Hb_052530_020--Hb_004137_040 Hb_000599_150 Hb_000599_150 Hb_052530_020--Hb_000599_150 Hb_052530_020--Hb_002150_090 Hb_052530_020--Hb_000028_190 Hb_052530_020--Hb_000103_200 Hb_000003_380 Hb_000003_380 Hb_002221_060--Hb_000003_380 Hb_002221_060--Hb_000230_300 Hb_002221_060--Hb_000483_450 Hb_002221_060--Hb_000103_200 Hb_000103_200--Hb_000230_300 Hb_005762_010 Hb_005762_010 Hb_000103_200--Hb_005762_010 Hb_000103_200--Hb_000028_190 Hb_010577_020 Hb_010577_020 Hb_000358_260--Hb_010577_020 Hb_000915_170 Hb_000915_170 Hb_000358_260--Hb_000915_170 Hb_005833_010 Hb_005833_010 Hb_000358_260--Hb_005833_010 Hb_056506_040 Hb_056506_040 Hb_000358_260--Hb_056506_040 Hb_006816_380 Hb_006816_380 Hb_000358_260--Hb_006816_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0420742 0.827903 1.08364 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.011369 0.887054

CAGE analysis