Hb_000928_040

Information

Type -
Description -
Location Contig928: 23266-24599
Sequence    

Annotation

kegg
ID rcu:RCOM_1517780
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002524040.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q42602
description Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2
trembl
ID B9SDH1
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1517780 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 89a2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62744: 23026-24708
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000928_040 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000645_210 0.1234200591 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X2 [Jatropha curcas]
3 Hb_003576_050 0.1323789765 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
4 Hb_003517_020 0.1332978501 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 3-like [Jatropha curcas]
5 Hb_000367_310 0.1485827025 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
6 Hb_007919_040 0.1491391803 - - PREDICTED: protein LYK5 [Jatropha curcas]
7 Hb_000093_150 0.1507526108 - - 6-phosphogluconolactonase, putative [Ricinus communis]
8 Hb_127886_010 0.1635190187 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
9 Hb_000098_310 0.1832688676 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
10 Hb_001114_070 0.1834168635 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g58400 [Jatropha curcas]
11 Hb_031527_060 0.1847868215 - - glutamate decarboxylase, putative [Ricinus communis]
12 Hb_009823_010 0.184878492 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
13 Hb_011512_130 0.1910004713 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
14 Hb_001206_090 0.1914157937 - - pyruvate decarboxylase [Hevea brasiliensis]
15 Hb_001408_050 0.1943556317 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001248_030 0.1947272059 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_165130_010 0.1978707765 - - PREDICTED: uncharacterized protein LOC105648304 [Jatropha curcas]
18 Hb_002043_010 0.1988522093 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_004195_110 0.2022391946 - - hypothetical protein JCGZ_24010 [Jatropha curcas]
20 Hb_067034_030 0.2034513257 - - ATP-binding cassette transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_000928_040 Hb_000928_040 Hb_000645_210 Hb_000645_210 Hb_000928_040--Hb_000645_210 Hb_003576_050 Hb_003576_050 Hb_000928_040--Hb_003576_050 Hb_003517_020 Hb_003517_020 Hb_000928_040--Hb_003517_020 Hb_000367_310 Hb_000367_310 Hb_000928_040--Hb_000367_310 Hb_007919_040 Hb_007919_040 Hb_000928_040--Hb_007919_040 Hb_000093_150 Hb_000093_150 Hb_000928_040--Hb_000093_150 Hb_127886_010 Hb_127886_010 Hb_000645_210--Hb_127886_010 Hb_001206_090 Hb_001206_090 Hb_000645_210--Hb_001206_090 Hb_031527_060 Hb_031527_060 Hb_000645_210--Hb_031527_060 Hb_001114_070 Hb_001114_070 Hb_000645_210--Hb_001114_070 Hb_000645_210--Hb_000093_150 Hb_009823_010 Hb_009823_010 Hb_003576_050--Hb_009823_010 Hb_003576_050--Hb_003517_020 Hb_001408_050 Hb_001408_050 Hb_003576_050--Hb_001408_050 Hb_000313_370 Hb_000313_370 Hb_003576_050--Hb_000313_370 Hb_001248_030 Hb_001248_030 Hb_003576_050--Hb_001248_030 Hb_003517_020--Hb_000313_370 Hb_000702_060 Hb_000702_060 Hb_003517_020--Hb_000702_060 Hb_003517_020--Hb_007919_040 Hb_002524_030 Hb_002524_030 Hb_003517_020--Hb_002524_030 Hb_000367_310--Hb_001408_050 Hb_055305_010 Hb_055305_010 Hb_000367_310--Hb_055305_010 Hb_000367_310--Hb_007919_040 Hb_000367_310--Hb_003576_050 Hb_003453_030 Hb_003453_030 Hb_000367_310--Hb_003453_030 Hb_007919_040--Hb_003576_050 Hb_000853_060 Hb_000853_060 Hb_007919_040--Hb_000853_060 Hb_002291_020 Hb_002291_020 Hb_007919_040--Hb_002291_020 Hb_000093_150--Hb_127886_010 Hb_004462_010 Hb_004462_010 Hb_000093_150--Hb_004462_010 Hb_000093_150--Hb_003517_020 Hb_002304_140 Hb_002304_140 Hb_000093_150--Hb_002304_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.02357 23.3474 1.2498 11.2506 2.16344 2.86194
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.44943 3.88465 6.30859 42.9322 4.9584

CAGE analysis