Hb_000931_020

Information

Type -
Description -
Location Contig931: 46666-52595
Sequence    

Annotation

kegg
ID rcu:RCOM_0103980
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012091974.1
description PREDICTED: uncharacterized protein LOC105649774 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LHL3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24057 PE=4 SV=1
Gene Ontology
ID GO:0005488
description heat shock protein 70 -interacting

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62853: 46633-52467
cDNA
(Sanger)
(ID:Location)		 051_A14.ab1: 46633-48475

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000931_020 0.0 - - PREDICTED: uncharacterized protein LOC105649774 isoform X1 [Jatropha curcas]
2 Hb_000622_340 0.0773738944 - - PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [Jatropha curcas]
3 Hb_003078_020 0.0963744814 - - PREDICTED: U-box domain-containing protein 9 [Jatropha curcas]
4 Hb_001357_040 0.0979746093 transcription factor TF Family: ERF ethylene-responsive transcription factor 3-like [Jatropha curcas]
5 Hb_008937_010 0.1061605606 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2 isoform X2 [Jatropha curcas]
6 Hb_000991_040 0.1097423503 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
7 Hb_000260_600 0.114175329 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005188_030 0.1154342821 - - amino acid transporter, putative [Ricinus communis]
9 Hb_000140_350 0.1203304052 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000322_070 0.1241047885 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1 [Jatropha curcas]
11 Hb_001489_100 0.1256657407 - - PREDICTED: hypersensitive-induced response protein 2 [Jatropha curcas]
12 Hb_142218_020 0.1263177151 - - actin family protein [Populus trichocarpa]
13 Hb_146081_010 0.1266107149 - - PREDICTED: protein SCAI [Jatropha curcas]
14 Hb_004531_120 0.1268040714 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
15 Hb_004410_120 0.1277749248 - - PREDICTED: uncharacterized protein LOC105633877 isoform X1 [Jatropha curcas]
16 Hb_007409_040 0.1281456671 - - actin family protein [Populus trichocarpa]
17 Hb_003617_020 0.129613302 - - PREDICTED: uncharacterized protein LOC105638179 [Jatropha curcas]
18 Hb_000352_070 0.1305563996 - - Potassium transporter, putative [Ricinus communis]
19 Hb_006573_210 0.1309221142 - - PREDICTED: protein SGT1 homolog [Jatropha curcas]
20 Hb_003181_040 0.1321781488 - - PREDICTED: uncharacterized protein LOC105647655 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000931_020 Hb_000931_020 Hb_000622_340 Hb_000622_340 Hb_000931_020--Hb_000622_340 Hb_003078_020 Hb_003078_020 Hb_000931_020--Hb_003078_020 Hb_001357_040 Hb_001357_040 Hb_000931_020--Hb_001357_040 Hb_008937_010 Hb_008937_010 Hb_000931_020--Hb_008937_010 Hb_000991_040 Hb_000991_040 Hb_000931_020--Hb_000991_040 Hb_000260_600 Hb_000260_600 Hb_000931_020--Hb_000260_600 Hb_000890_030 Hb_000890_030 Hb_000622_340--Hb_000890_030 Hb_000622_340--Hb_000991_040 Hb_012760_030 Hb_012760_030 Hb_000622_340--Hb_012760_030 Hb_000622_340--Hb_008937_010 Hb_010407_060 Hb_010407_060 Hb_000622_340--Hb_010407_060 Hb_000094_310 Hb_000094_310 Hb_003078_020--Hb_000094_310 Hb_000487_380 Hb_000487_380 Hb_003078_020--Hb_000487_380 Hb_003078_020--Hb_008937_010 Hb_000941_130 Hb_000941_130 Hb_003078_020--Hb_000941_130 Hb_004410_120 Hb_004410_120 Hb_003078_020--Hb_004410_120 Hb_001489_100 Hb_001489_100 Hb_003078_020--Hb_001489_100 Hb_003617_020 Hb_003617_020 Hb_001357_040--Hb_003617_020 Hb_004725_050 Hb_004725_050 Hb_001357_040--Hb_004725_050 Hb_001377_270 Hb_001377_270 Hb_001357_040--Hb_001377_270 Hb_001674_030 Hb_001674_030 Hb_001357_040--Hb_001674_030 Hb_000080_150 Hb_000080_150 Hb_001357_040--Hb_000080_150 Hb_008937_010--Hb_010407_060 Hb_008937_010--Hb_001489_100 Hb_008253_020 Hb_008253_020 Hb_008937_010--Hb_008253_020 Hb_000120_910 Hb_000120_910 Hb_008937_010--Hb_000120_910 Hb_001856_220 Hb_001856_220 Hb_008937_010--Hb_001856_220 Hb_000402_230 Hb_000402_230 Hb_008937_010--Hb_000402_230 Hb_000991_040--Hb_000260_600 Hb_000815_240 Hb_000815_240 Hb_000991_040--Hb_000815_240 Hb_000991_040--Hb_008937_010 Hb_000390_250 Hb_000390_250 Hb_000991_040--Hb_000390_250 Hb_000322_070 Hb_000322_070 Hb_000991_040--Hb_000322_070 Hb_000140_350 Hb_000140_350 Hb_000260_600--Hb_000140_350 Hb_000890_230 Hb_000890_230 Hb_000260_600--Hb_000890_230 Hb_000260_600--Hb_000322_070 Hb_000009_400 Hb_000009_400 Hb_000260_600--Hb_000009_400 Hb_000260_600--Hb_003617_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.66973 10.0641 4.76092 13.7242 8.01034 5.69587
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.14897 2.2564 6.30769 5.1781 3.26645

CAGE analysis