Hb_000932_060

Information

Type -
Description -
Location Contig932: 85787-89034
Sequence    

Annotation

kegg
ID rcu:RCOM_0212730
description hypothetical protein
nr
ID XP_002531255.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SZ36
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0212730 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000932_060 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001247_150 0.1034268576 - - hypothetical protein JCGZ_23179 [Jatropha curcas]
3 Hb_001936_180 0.1062640356 - - PREDICTED: protein NSP-INTERACTING KINASE 3 [Jatropha curcas]
4 Hb_022092_110 0.1121123893 - - PREDICTED: probable protein phosphatase 2C 52 [Jatropha curcas]
5 Hb_010557_020 0.1126000089 - - Mlo protein [Hevea brasiliensis]
6 Hb_026240_020 0.1153189723 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
7 Hb_001946_200 0.1162171858 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
8 Hb_004162_320 0.1191101612 - - PREDICTED: uncharacterized protein LOC105628009 isoform X1 [Jatropha curcas]
9 Hb_000418_170 0.119541786 - - PREDICTED: ABC transporter C family member 12-like isoform X4 [Populus euphratica]
10 Hb_010174_180 0.12050839 - - protein binding protein, putative [Ricinus communis]
11 Hb_001440_010 0.1213350368 - - PREDICTED: armadillo repeat-containing kinesin-like protein 1 [Populus euphratica]
12 Hb_005892_040 0.1232692031 - - hypothetical protein JCGZ_02368 [Jatropha curcas]
13 Hb_119066_010 0.1257457411 - - PREDICTED: uncharacterized protein LOC105641552 [Jatropha curcas]
14 Hb_000290_030 0.1263128555 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
15 Hb_000834_220 0.1267274871 - - PREDICTED: uncharacterized protein LOC105637705 [Jatropha curcas]
16 Hb_000977_030 0.1271610699 - - unnamed protein product [Vitis vinifera]
17 Hb_009113_080 0.1289034994 - - PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Jatropha curcas]
18 Hb_003506_010 0.1289493497 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
19 Hb_031385_010 0.1298867718 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
20 Hb_003092_020 0.1321263962 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000932_060 Hb_000932_060 Hb_001247_150 Hb_001247_150 Hb_000932_060--Hb_001247_150 Hb_001936_180 Hb_001936_180 Hb_000932_060--Hb_001936_180 Hb_022092_110 Hb_022092_110 Hb_000932_060--Hb_022092_110 Hb_010557_020 Hb_010557_020 Hb_000932_060--Hb_010557_020 Hb_026240_020 Hb_026240_020 Hb_000932_060--Hb_026240_020 Hb_001946_200 Hb_001946_200 Hb_000932_060--Hb_001946_200 Hb_021065_010 Hb_021065_010 Hb_001247_150--Hb_021065_010 Hb_000834_180 Hb_000834_180 Hb_001247_150--Hb_000834_180 Hb_000418_170 Hb_000418_170 Hb_001247_150--Hb_000418_170 Hb_009113_080 Hb_009113_080 Hb_001247_150--Hb_009113_080 Hb_001247_150--Hb_022092_110 Hb_001936_180--Hb_022092_110 Hb_000365_430 Hb_000365_430 Hb_001936_180--Hb_000365_430 Hb_001440_010 Hb_001440_010 Hb_001936_180--Hb_001440_010 Hb_001936_180--Hb_001946_200 Hb_000645_160 Hb_000645_160 Hb_001936_180--Hb_000645_160 Hb_001936_180--Hb_000418_170 Hb_022092_110--Hb_001946_200 Hb_022092_110--Hb_001440_010 Hb_000735_060 Hb_000735_060 Hb_022092_110--Hb_000735_060 Hb_022092_110--Hb_000418_170 Hb_002311_280 Hb_002311_280 Hb_022092_110--Hb_002311_280 Hb_000290_030 Hb_000290_030 Hb_010557_020--Hb_000290_030 Hb_000856_200 Hb_000856_200 Hb_010557_020--Hb_000856_200 Hb_010222_040 Hb_010222_040 Hb_010557_020--Hb_010222_040 Hb_144449_010 Hb_144449_010 Hb_010557_020--Hb_144449_010 Hb_000473_100 Hb_000473_100 Hb_010557_020--Hb_000473_100 Hb_000162_200 Hb_000162_200 Hb_010557_020--Hb_000162_200 Hb_000977_030 Hb_000977_030 Hb_026240_020--Hb_000977_030 Hb_003092_020 Hb_003092_020 Hb_026240_020--Hb_003092_020 Hb_005892_040 Hb_005892_040 Hb_026240_020--Hb_005892_040 Hb_003454_050 Hb_003454_050 Hb_026240_020--Hb_003454_050 Hb_005730_110 Hb_005730_110 Hb_026240_020--Hb_005730_110 Hb_003506_010 Hb_003506_010 Hb_026240_020--Hb_003506_010 Hb_001946_200--Hb_001440_010 Hb_001946_200--Hb_009113_080 Hb_001946_200--Hb_026240_020 Hb_032920_030 Hb_032920_030 Hb_001946_200--Hb_032920_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.504866 1.41478 1.6314 0 0.0229427
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0481571 0 0.0699014 0.684777 1.16564

CAGE analysis