Hb_000937_010

Information

Type -
Description -
Location Contig937: 28318-29568
Sequence    

Annotation

kegg
ID rcu:RCOM_1609080
description hypothetical protein
nr
ID XP_002511614.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9SD53
description UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1
trembl
ID B9RD25
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609080 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000937_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000115_020 0.0557521792 transcription factor TF Family: C2C2-CO-like zinc finger family protein [Populus trichocarpa]
3 Hb_005618_030 0.0632141292 - - PREDICTED: cytochrome P450 734A1-like [Jatropha curcas]
4 Hb_000625_080 0.0658706997 - - PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Jatropha curcas]
5 Hb_008013_020 0.0713970871 - - PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Jatropha curcas]
6 Hb_006573_110 0.072726375 - - PREDICTED: uncharacterized protein PAM68-like [Jatropha curcas]
7 Hb_007101_120 0.0762009031 - - PREDICTED: uncharacterized protein LOC105649846 [Jatropha curcas]
8 Hb_000510_180 0.0782780412 - - unknown [Lotus japonicus]
9 Hb_003921_020 0.0792498094 - - hypothetical protein JCGZ_10628 [Jatropha curcas]
10 Hb_000191_090 0.0799422971 transcription factor TF Family: MYB GHMYB10, putative [Theobroma cacao]
11 Hb_020805_050 0.0830584034 - - PREDICTED: MLO-like protein 9 [Jatropha curcas]
12 Hb_003921_010 0.0863174371 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005649_060 0.0880468901 - - PREDICTED: uncharacterized protein LOC105644161 [Jatropha curcas]
14 Hb_002529_120 0.0886377182 - - PREDICTED: cyclin-dependent kinase inhibitor 7-like [Jatropha curcas]
15 Hb_005245_110 0.0888144085 - - hypothetical protein CISIN_1g0225141mg [Citrus sinensis]
16 Hb_004712_220 0.0901805245 - - conserved hypothetical protein [Ricinus communis]
17 Hb_006665_020 0.0906063968 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
18 Hb_000531_100 0.0927939648 - - Photosystem I reaction center subunit III, chloroplast precursor, putative [Ricinus communis]
19 Hb_099182_010 0.0932505481 - - PREDICTED: uncharacterized protein LOC101214783 [Cucumis sativus]
20 Hb_000977_250 0.0937462662 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000937_010 Hb_000937_010 Hb_000115_020 Hb_000115_020 Hb_000937_010--Hb_000115_020 Hb_005618_030 Hb_005618_030 Hb_000937_010--Hb_005618_030 Hb_000625_080 Hb_000625_080 Hb_000937_010--Hb_000625_080 Hb_008013_020 Hb_008013_020 Hb_000937_010--Hb_008013_020 Hb_006573_110 Hb_006573_110 Hb_000937_010--Hb_006573_110 Hb_007101_120 Hb_007101_120 Hb_000937_010--Hb_007101_120 Hb_005649_060 Hb_005649_060 Hb_000115_020--Hb_005649_060 Hb_000809_190 Hb_000809_190 Hb_000115_020--Hb_000809_190 Hb_000445_270 Hb_000445_270 Hb_000115_020--Hb_000445_270 Hb_004712_220 Hb_004712_220 Hb_000115_020--Hb_004712_220 Hb_001751_050 Hb_001751_050 Hb_000115_020--Hb_001751_050 Hb_000030_070 Hb_000030_070 Hb_005618_030--Hb_000030_070 Hb_005618_030--Hb_008013_020 Hb_003683_170 Hb_003683_170 Hb_005618_030--Hb_003683_170 Hb_006555_020 Hb_006555_020 Hb_005618_030--Hb_006555_020 Hb_096267_010 Hb_096267_010 Hb_005618_030--Hb_096267_010 Hb_000510_180 Hb_000510_180 Hb_000625_080--Hb_000510_180 Hb_009193_020 Hb_009193_020 Hb_000625_080--Hb_009193_020 Hb_000625_080--Hb_008013_020 Hb_001717_060 Hb_001717_060 Hb_000625_080--Hb_001717_060 Hb_000977_250 Hb_000977_250 Hb_000625_080--Hb_000977_250 Hb_000625_080--Hb_006573_110 Hb_008013_020--Hb_006573_110 Hb_003921_020 Hb_003921_020 Hb_008013_020--Hb_003921_020 Hb_000262_090 Hb_000262_090 Hb_008013_020--Hb_000262_090 Hb_000821_030 Hb_000821_030 Hb_008013_020--Hb_000821_030 Hb_002818_110 Hb_002818_110 Hb_008013_020--Hb_002818_110 Hb_000210_030 Hb_000210_030 Hb_008013_020--Hb_000210_030 Hb_006573_110--Hb_003921_020 Hb_006573_110--Hb_002818_110 Hb_006573_110--Hb_000262_090 Hb_006573_110--Hb_000210_030 Hb_006573_110--Hb_000821_030 Hb_020805_050 Hb_020805_050 Hb_007101_120--Hb_020805_050 Hb_004837_230 Hb_004837_230 Hb_007101_120--Hb_004837_230 Hb_000191_090 Hb_000191_090 Hb_007101_120--Hb_000191_090 Hb_005245_110 Hb_005245_110 Hb_007101_120--Hb_005245_110 Hb_008484_080 Hb_008484_080 Hb_007101_120--Hb_008484_080 Hb_007101_120--Hb_005618_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0646887 1.65237 0.212953 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.82684

CAGE analysis