Hb_000941_150

Information

Type -
Description -
Location Contig941: 179348-190411
Sequence    

Annotation

kegg
ID rcu:RCOM_0278610
description hypothetical protein
nr
ID XP_012076058.1
description PREDICTED: uncharacterized protein LOC105637253 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQA9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12768 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63180: 179590-186718
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000941_150 0.0 - - PREDICTED: uncharacterized protein LOC105637253 isoform X1 [Jatropha curcas]
2 Hb_000409_030 0.0822229744 - - PREDICTED: uncharacterized protein LOC105642693 [Jatropha curcas]
3 Hb_000976_100 0.0848881263 - - eukaryotic translation elongation factor, putative [Ricinus communis]
4 Hb_002099_080 0.0878130871 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Jatropha curcas]
5 Hb_000183_030 0.0887359598 - - PREDICTED: probable zinc transporter protein DDB_G0291141 [Populus euphratica]
6 Hb_000922_030 0.0921207115 - - PREDICTED: protein EXECUTER 2, chloroplastic [Jatropha curcas]
7 Hb_007820_010 0.0969407103 transcription factor TF Family: SWI/SNF-SWI3 PREDICTED: protein FLOWERING LOCUS D [Jatropha curcas]
8 Hb_002768_060 0.0971530405 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X1 [Jatropha curcas]
9 Hb_002874_110 0.0972891148 - - PREDICTED: uncharacterized protein LOC105637451 [Jatropha curcas]
10 Hb_001916_090 0.0973067722 - - beta-1,2-n-acetylglucosaminyltransferase II, putative [Ricinus communis]
11 Hb_004374_110 0.0977692875 - - PREDICTED: uncharacterized protein LOC105645768 [Jatropha curcas]
12 Hb_000484_010 0.0989278129 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 23 [Jatropha curcas]
13 Hb_004679_030 0.0991707245 - - PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Jatropha curcas]
14 Hb_003340_010 0.1008373746 - - PREDICTED: ubiquitin-activating enzyme E1 1 [Vitis vinifera]
15 Hb_000363_040 0.101065699 - - Protein transport protein Sec24A, putative [Ricinus communis]
16 Hb_000809_230 0.1026363541 - - PREDICTED: uncharacterized protein LOC105639681 isoform X1 [Jatropha curcas]
17 Hb_000365_240 0.1027350513 - - PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like [Jatropha curcas]
18 Hb_000359_210 0.103600146 - - conserved hypothetical protein [Ricinus communis]
19 Hb_135572_010 0.1052076222 - - GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
20 Hb_009296_080 0.1055540083 - - PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000941_150 Hb_000941_150 Hb_000409_030 Hb_000409_030 Hb_000941_150--Hb_000409_030 Hb_000976_100 Hb_000976_100 Hb_000941_150--Hb_000976_100 Hb_002099_080 Hb_002099_080 Hb_000941_150--Hb_002099_080 Hb_000183_030 Hb_000183_030 Hb_000941_150--Hb_000183_030 Hb_000922_030 Hb_000922_030 Hb_000941_150--Hb_000922_030 Hb_007820_010 Hb_007820_010 Hb_000941_150--Hb_007820_010 Hb_004679_030 Hb_004679_030 Hb_000409_030--Hb_004679_030 Hb_002768_060 Hb_002768_060 Hb_000409_030--Hb_002768_060 Hb_000409_030--Hb_000976_100 Hb_009296_080 Hb_009296_080 Hb_000409_030--Hb_009296_080 Hb_012114_100 Hb_012114_100 Hb_000409_030--Hb_012114_100 Hb_000237_040 Hb_000237_040 Hb_000976_100--Hb_000237_040 Hb_027445_020 Hb_027445_020 Hb_000976_100--Hb_027445_020 Hb_001369_360 Hb_001369_360 Hb_000976_100--Hb_001369_360 Hb_002025_330 Hb_002025_330 Hb_000976_100--Hb_002025_330 Hb_000363_040 Hb_000363_040 Hb_000976_100--Hb_000363_040 Hb_004019_120 Hb_004019_120 Hb_000976_100--Hb_004019_120 Hb_002099_080--Hb_007820_010 Hb_002055_040 Hb_002055_040 Hb_002099_080--Hb_002055_040 Hb_002667_050 Hb_002667_050 Hb_002099_080--Hb_002667_050 Hb_009296_040 Hb_009296_040 Hb_002099_080--Hb_009296_040 Hb_002063_020 Hb_002063_020 Hb_002099_080--Hb_002063_020 Hb_000388_090 Hb_000388_090 Hb_002099_080--Hb_000388_090 Hb_000484_010 Hb_000484_010 Hb_000183_030--Hb_000484_010 Hb_000392_160 Hb_000392_160 Hb_000183_030--Hb_000392_160 Hb_001865_070 Hb_001865_070 Hb_000183_030--Hb_001865_070 Hb_002025_030 Hb_002025_030 Hb_000183_030--Hb_002025_030 Hb_015292_060 Hb_015292_060 Hb_000183_030--Hb_015292_060 Hb_000358_050 Hb_000358_050 Hb_000922_030--Hb_000358_050 Hb_000922_030--Hb_002025_330 Hb_135572_010 Hb_135572_010 Hb_000922_030--Hb_135572_010 Hb_004143_160 Hb_004143_160 Hb_000922_030--Hb_004143_160 Hb_000365_240 Hb_000365_240 Hb_000922_030--Hb_000365_240 Hb_007472_090 Hb_007472_090 Hb_000922_030--Hb_007472_090 Hb_007820_010--Hb_002055_040 Hb_003032_020 Hb_003032_020 Hb_007820_010--Hb_003032_020 Hb_000366_040 Hb_000366_040 Hb_007820_010--Hb_000366_040 Hb_000204_120 Hb_000204_120 Hb_007820_010--Hb_000204_120 Hb_000352_190 Hb_000352_190 Hb_007820_010--Hb_000352_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.76198 4.03706 2.69418 6.79147 3.82853 3.97576
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.94683 2.77909 6.19449 6.31489 10.6908

CAGE analysis