Hb_000946_020

Information

Type -
Description -
Location Contig946: 14082-14588
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa023262mg
description hypothetical protein
nr
ID XP_007226608.1
description hypothetical protein PRUPE_ppa023262mg [Prunus persica]
swissprot
ID Q8W2N5
description 9-divinyl ether synthase OS=Nicotiana tabacum GN=DES1 PE=1 SV=1
trembl
ID M5XNY7
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023262mg PE=4 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000946_020 0.0 - - hypothetical protein PRUPE_ppa023262mg [Prunus persica]
2 Hb_169597_010 0.0250587375 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
3 Hb_003927_030 0.0302655571 - - unnamed protein product [Coffea canephora]
4 Hb_000052_030 0.0316045403 - - -
5 Hb_006261_010 0.034917744 - - PREDICTED: uncharacterized protein LOC104110884 [Nicotiana tomentosiformis]
6 Hb_007757_090 0.0413277835 - - PREDICTED: uncharacterized protein LOC105793478 [Gossypium raimondii]
7 Hb_005625_050 0.0491180637 - - hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
8 Hb_002570_050 0.0548865149 - - PREDICTED: uncharacterized protein LOC104897677 [Beta vulgaris subsp. vulgaris]
9 Hb_019299_050 0.0709191985 - - -
10 Hb_093039_010 0.073227069 - - JHL22C18.10 [Jatropha curcas]
11 Hb_000190_130 0.0768846451 - - cysteine protease inhibitor [Populus tremula]
12 Hb_003780_010 0.0933956559 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000574_490 0.0990671445 - - PREDICTED: probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Jatropha curcas]
14 Hb_006907_110 0.1068684693 - - -
15 Hb_000575_050 0.1077648373 - - hypothetical protein CISIN_1g0468601mg, partial [Citrus sinensis]
16 Hb_021888_160 0.1101081874 - - -
17 Hb_000967_030 0.1106449139 - - -
18 Hb_018202_060 0.1169343481 - - PREDICTED: germin-like protein subfamily 1 member 13 [Jatropha curcas]
19 Hb_000501_080 0.1178177084 - - hypothetical protein OsJ_22457 [Oryza sativa Japonica Group]
20 Hb_174662_020 0.1181473356 - - PREDICTED: uncharacterized protein LOC104888075 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_000946_020 Hb_000946_020 Hb_169597_010 Hb_169597_010 Hb_000946_020--Hb_169597_010 Hb_003927_030 Hb_003927_030 Hb_000946_020--Hb_003927_030 Hb_000052_030 Hb_000052_030 Hb_000946_020--Hb_000052_030 Hb_006261_010 Hb_006261_010 Hb_000946_020--Hb_006261_010 Hb_007757_090 Hb_007757_090 Hb_000946_020--Hb_007757_090 Hb_005625_050 Hb_005625_050 Hb_000946_020--Hb_005625_050 Hb_169597_010--Hb_003927_030 Hb_169597_010--Hb_000052_030 Hb_002570_050 Hb_002570_050 Hb_169597_010--Hb_002570_050 Hb_093039_010 Hb_093039_010 Hb_169597_010--Hb_093039_010 Hb_000190_130 Hb_000190_130 Hb_169597_010--Hb_000190_130 Hb_003927_030--Hb_000052_030 Hb_003927_030--Hb_002570_050 Hb_003927_030--Hb_093039_010 Hb_003927_030--Hb_000190_130 Hb_000052_030--Hb_002570_050 Hb_000052_030--Hb_093039_010 Hb_000052_030--Hb_000190_130 Hb_006261_010--Hb_007757_090 Hb_006261_010--Hb_005625_050 Hb_019299_050 Hb_019299_050 Hb_006261_010--Hb_019299_050 Hb_006261_010--Hb_169597_010 Hb_006261_010--Hb_003927_030 Hb_007757_090--Hb_005625_050 Hb_007757_090--Hb_019299_050 Hb_007757_090--Hb_169597_010 Hb_000967_030 Hb_000967_030 Hb_007757_090--Hb_000967_030 Hb_005625_050--Hb_019299_050 Hb_005625_050--Hb_000967_030 Hb_005625_050--Hb_169597_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.30074 0.851204

CAGE analysis