Hb_000948_100

Information

Type -
Description -
Location Contig948: 120042-126677
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000948_100 0.0 - - -
2 Hb_028486_070 0.2375863952 - - hypothetical protein CISIN_1g028119mg [Citrus sinensis]
3 Hb_000350_080 0.2511094509 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
4 Hb_007808_020 0.2535467541 - - -
5 Hb_001959_150 0.2630212315 - - -
6 Hb_005072_010 0.273579948 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
7 Hb_000068_030 0.2757788047 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
8 Hb_000392_330 0.2895367367 - - PREDICTED: protein kinase 2B, chloroplastic-like [Jatropha curcas]
9 Hb_186982_010 0.2928810377 - - PREDICTED: uncharacterized protein LOC104120222 [Nicotiana tomentosiformis]
10 Hb_080653_010 0.2964911207 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_008516_020 0.3035744881 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
12 Hb_174876_010 0.3078211414 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
13 Hb_000375_340 0.3117169947 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Populus euphratica]
14 Hb_004157_110 0.3227946324 - - -
15 Hb_003086_130 0.3282429507 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
16 Hb_001080_010 0.3301040519 - - -
17 Hb_131060_010 0.3310886201 - - PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
18 Hb_011360_020 0.331147539 - - -
19 Hb_003754_080 0.336312898 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
20 Hb_010417_010 0.3366983705 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000948_100 Hb_000948_100 Hb_028486_070 Hb_028486_070 Hb_000948_100--Hb_028486_070 Hb_000350_080 Hb_000350_080 Hb_000948_100--Hb_000350_080 Hb_007808_020 Hb_007808_020 Hb_000948_100--Hb_007808_020 Hb_001959_150 Hb_001959_150 Hb_000948_100--Hb_001959_150 Hb_005072_010 Hb_005072_010 Hb_000948_100--Hb_005072_010 Hb_000068_030 Hb_000068_030 Hb_000948_100--Hb_000068_030 Hb_004157_110 Hb_004157_110 Hb_028486_070--Hb_004157_110 Hb_020580_010 Hb_020580_010 Hb_028486_070--Hb_020580_010 Hb_131060_010 Hb_131060_010 Hb_028486_070--Hb_131060_010 Hb_013429_020 Hb_013429_020 Hb_028486_070--Hb_013429_020 Hb_007101_230 Hb_007101_230 Hb_028486_070--Hb_007101_230 Hb_000350_080--Hb_007808_020 Hb_000350_080--Hb_001959_150 Hb_000350_080--Hb_005072_010 Hb_000350_080--Hb_000068_030 Hb_080653_010 Hb_080653_010 Hb_000350_080--Hb_080653_010 Hb_001080_010 Hb_001080_010 Hb_000350_080--Hb_001080_010 Hb_007808_020--Hb_001959_150 Hb_007808_020--Hb_005072_010 Hb_007808_020--Hb_000068_030 Hb_007808_020--Hb_131060_010 Hb_007808_020--Hb_080653_010 Hb_001959_150--Hb_005072_010 Hb_001959_150--Hb_000068_030 Hb_001959_150--Hb_080653_010 Hb_000249_120 Hb_000249_120 Hb_001959_150--Hb_000249_120 Hb_005072_010--Hb_000068_030 Hb_005072_010--Hb_080653_010 Hb_005072_010--Hb_000249_120 Hb_000068_030--Hb_080653_010 Hb_000068_030--Hb_000249_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.0355878
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0728617 0.128481 0.0595653 0

CAGE analysis