Hb_000951_100

Information

Type -
Description -
Location Contig951: 173277-177489
Sequence    

Annotation

kegg
ID mdm:103436565
description uncharacterized LOC103436565
nr
ID XP_008373225.1
description PREDICTED: uncharacterized protein LOC103436565 isoform X1 [Malus domestica]
swissprot
ID A1JNE0
description Zinc transport protein ZntB OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=zntB PE=3 SV=1
trembl
ID M5VMY1
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005879mg PE=4 SV=1
Gene Ontology
ID GO:0016020
description magnesium transporter -like family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000951_100 0.0 - - PREDICTED: uncharacterized protein LOC103436565 isoform X1 [Malus domestica]
2 Hb_000169_080 0.0932887948 transcription factor TF Family: TUB PREDICTED: tubby-like F-box protein 3 [Jatropha curcas]
3 Hb_000081_010 0.098813999 - - hypothetical protein B456_012G056000 [Gossypium raimondii]
4 Hb_001124_010 0.1002326081 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X2 [Jatropha curcas]
5 Hb_005194_020 0.101300016 - - PREDICTED: UPF0553 protein-like isoform X1 [Jatropha curcas]
6 Hb_004096_180 0.1016359924 - - PREDICTED: 14-3-3-like protein A [Jatropha curcas]
7 Hb_011671_310 0.1032986896 - - PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 [Jatropha curcas]
8 Hb_009767_070 0.1044595174 - - PREDICTED: uncharacterized protein LOC105631980 [Jatropha curcas]
9 Hb_003213_010 0.1064461686 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
10 Hb_001761_120 0.106850819 - - hypothetical protein JCGZ_22564 [Jatropha curcas]
11 Hb_004312_010 0.1099620092 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X2 [Jatropha curcas]
12 Hb_011519_010 0.1119687601 - - PREDICTED: uncharacterized protein LOC105645310 [Jatropha curcas]
13 Hb_005867_090 0.1122119399 - - PREDICTED: uncharacterized protein LOC105630712 [Jatropha curcas]
14 Hb_004162_130 0.1131393159 - - conserved hypothetical protein [Ricinus communis]
15 Hb_012762_030 0.1132951203 - - PREDICTED: uncharacterized protein LOC105634062 [Jatropha curcas]
16 Hb_164010_040 0.1146229889 - - serine/threonine protein kinase, putative [Ricinus communis]
17 Hb_002073_200 0.1158025588 - - Phosphatase 2A-2 [Theobroma cacao]
18 Hb_000856_380 0.1175168598 - - ubiquitin-conjugating enzyme [Medicago truncatula]
19 Hb_000173_310 0.1182426653 - - PREDICTED: uncharacterized protein LOC105631893 isoform X1 [Jatropha curcas]
20 Hb_002311_480 0.1187741457 - - PREDICTED: condensin-2 complex subunit H2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000951_100 Hb_000951_100 Hb_000169_080 Hb_000169_080 Hb_000951_100--Hb_000169_080 Hb_000081_010 Hb_000081_010 Hb_000951_100--Hb_000081_010 Hb_001124_010 Hb_001124_010 Hb_000951_100--Hb_001124_010 Hb_005194_020 Hb_005194_020 Hb_000951_100--Hb_005194_020 Hb_004096_180 Hb_004096_180 Hb_000951_100--Hb_004096_180 Hb_011671_310 Hb_011671_310 Hb_000951_100--Hb_011671_310 Hb_001761_120 Hb_001761_120 Hb_000169_080--Hb_001761_120 Hb_043792_010 Hb_043792_010 Hb_000169_080--Hb_043792_010 Hb_004943_030 Hb_004943_030 Hb_000169_080--Hb_004943_030 Hb_001410_020 Hb_001410_020 Hb_000169_080--Hb_001410_020 Hb_001005_020 Hb_001005_020 Hb_000169_080--Hb_001005_020 Hb_008695_090 Hb_008695_090 Hb_000169_080--Hb_008695_090 Hb_000081_010--Hb_004096_180 Hb_002872_030 Hb_002872_030 Hb_000081_010--Hb_002872_030 Hb_006588_070 Hb_006588_070 Hb_000081_010--Hb_006588_070 Hb_073973_130 Hb_073973_130 Hb_000081_010--Hb_073973_130 Hb_000076_160 Hb_000076_160 Hb_000081_010--Hb_000076_160 Hb_014361_150 Hb_014361_150 Hb_000081_010--Hb_014361_150 Hb_016467_010 Hb_016467_010 Hb_001124_010--Hb_016467_010 Hb_012395_170 Hb_012395_170 Hb_001124_010--Hb_012395_170 Hb_001124_010--Hb_001761_120 Hb_002073_200 Hb_002073_200 Hb_001124_010--Hb_002073_200 Hb_084247_010 Hb_084247_010 Hb_001124_010--Hb_084247_010 Hb_164010_040 Hb_164010_040 Hb_001124_010--Hb_164010_040 Hb_000979_060 Hb_000979_060 Hb_005194_020--Hb_000979_060 Hb_004635_030 Hb_004635_030 Hb_005194_020--Hb_004635_030 Hb_002311_480 Hb_002311_480 Hb_005194_020--Hb_002311_480 Hb_005194_020--Hb_011671_310 Hb_005194_020--Hb_001005_020 Hb_004096_180--Hb_002872_030 Hb_000087_060 Hb_000087_060 Hb_004096_180--Hb_000087_060 Hb_000096_120 Hb_000096_120 Hb_004096_180--Hb_000096_120 Hb_002028_210 Hb_002028_210 Hb_004096_180--Hb_002028_210 Hb_000359_040 Hb_000359_040 Hb_004096_180--Hb_000359_040 Hb_027428_010 Hb_027428_010 Hb_004096_180--Hb_027428_010 Hb_001500_120 Hb_001500_120 Hb_011671_310--Hb_001500_120 Hb_005977_030 Hb_005977_030 Hb_011671_310--Hb_005977_030 Hb_011671_310--Hb_002311_480 Hb_011671_310--Hb_001005_020 Hb_011671_310--Hb_001761_120 Hb_007290_030 Hb_007290_030 Hb_011671_310--Hb_007290_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.80316 5.8952 9.60103 4.5079 3.16126 4.73249
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.5762 5.26694 5.91515 2.28949 2.21002

CAGE analysis