Hb_000951_110

Information

Type -
Description -
Location Contig951: 182737-186655
Sequence    

Annotation

kegg
ID rcu:RCOM_0817860
description heat shock protein, putative (EC:1.3.1.74)
nr
ID XP_002518324.1
description heat shock protein, putative [Ricinus communis]
swissprot
ID Q01899
description Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris PE=2 SV=1
trembl
ID B9RX55
description Heat shock protein, putative OS=Ricinus communis GN=RCOM_0817860 PE=3 SV=1
Gene Ontology
ID GO:0005524
description heat shock 70 kda mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63419: 182838-186502
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000951_110 0.0 - - heat shock protein, putative [Ricinus communis]
2 Hb_000832_130 0.0738655561 - - PREDICTED: pentatricopeptide repeat-containing protein At2g39620 [Jatropha curcas]
3 Hb_020665_030 0.0753203729 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000671_110 0.0853893111 - - hypothetical protein JCGZ_23794 [Jatropha curcas]
5 Hb_002471_210 0.0890995559 - - PREDICTED: THO complex subunit 2 [Jatropha curcas]
6 Hb_002301_260 0.0904045907 - - hypothetical protein MIMGU_mgv1a0031591mg, partial [Erythranthe guttata]
7 Hb_007108_030 0.0914766604 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
8 Hb_000768_190 0.0961534495 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
9 Hb_000173_510 0.0966755189 - - PREDICTED: AP-5 complex subunit mu [Jatropha curcas]
10 Hb_064903_010 0.0977754004 - - PREDICTED: T-complex protein 1 subunit delta [Jatropha curcas]
11 Hb_000347_570 0.098175562 - - PREDICTED: transcription initiation factor TFIID subunit 12b isoform X1 [Jatropha curcas]
12 Hb_003544_100 0.1002843416 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Jatropha curcas]
13 Hb_004096_100 0.100563193 - - PREDICTED: NADPH-dependent diflavin oxidoreductase 1 [Jatropha curcas]
14 Hb_003044_020 0.1016492437 - - PREDICTED: uncharacterized protein LOC105641479 [Jatropha curcas]
15 Hb_009151_020 0.1026048757 - - PREDICTED: DNA polymerase delta catalytic subunit [Jatropha curcas]
16 Hb_001025_080 0.103265586 - - hypothetical protein JCGZ_11431 [Jatropha curcas]
17 Hb_001028_070 0.1038579144 - - PREDICTED: WD repeat-containing protein 75 isoform X2 [Jatropha curcas]
18 Hb_000768_070 0.1040557241 transcription factor TF Family: SNF2 PREDICTED: TATA-binding protein-associated factor BTAF1 isoform X2 [Jatropha curcas]
19 Hb_003847_120 0.1045483102 - - WD-repeat protein, putative [Ricinus communis]
20 Hb_116929_010 0.1048940961 - - PREDICTED: nuclear-pore anchor isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000951_110 Hb_000951_110 Hb_000832_130 Hb_000832_130 Hb_000951_110--Hb_000832_130 Hb_020665_030 Hb_020665_030 Hb_000951_110--Hb_020665_030 Hb_000671_110 Hb_000671_110 Hb_000951_110--Hb_000671_110 Hb_002471_210 Hb_002471_210 Hb_000951_110--Hb_002471_210 Hb_002301_260 Hb_002301_260 Hb_000951_110--Hb_002301_260 Hb_007108_030 Hb_007108_030 Hb_000951_110--Hb_007108_030 Hb_004718_010 Hb_004718_010 Hb_000832_130--Hb_004718_010 Hb_010578_060 Hb_010578_060 Hb_000832_130--Hb_010578_060 Hb_064903_010 Hb_064903_010 Hb_000832_130--Hb_064903_010 Hb_000832_130--Hb_002471_210 Hb_111985_080 Hb_111985_080 Hb_000832_130--Hb_111985_080 Hb_009151_020 Hb_009151_020 Hb_020665_030--Hb_009151_020 Hb_000329_130 Hb_000329_130 Hb_020665_030--Hb_000329_130 Hb_000347_570 Hb_000347_570 Hb_020665_030--Hb_000347_570 Hb_000714_050 Hb_000714_050 Hb_020665_030--Hb_000714_050 Hb_003847_120 Hb_003847_120 Hb_020665_030--Hb_003847_120 Hb_000320_200 Hb_000320_200 Hb_020665_030--Hb_000320_200 Hb_000671_110--Hb_002301_260 Hb_004096_100 Hb_004096_100 Hb_000671_110--Hb_004096_100 Hb_001025_080 Hb_001025_080 Hb_000671_110--Hb_001025_080 Hb_002903_080 Hb_002903_080 Hb_000671_110--Hb_002903_080 Hb_000671_110--Hb_020665_030 Hb_007849_020 Hb_007849_020 Hb_002471_210--Hb_007849_020 Hb_002291_070 Hb_002291_070 Hb_002471_210--Hb_002291_070 Hb_000475_020 Hb_000475_020 Hb_002471_210--Hb_000475_020 Hb_001811_120 Hb_001811_120 Hb_002471_210--Hb_001811_120 Hb_000250_070 Hb_000250_070 Hb_002471_210--Hb_000250_070 Hb_001322_210 Hb_001322_210 Hb_002471_210--Hb_001322_210 Hb_019813_010 Hb_019813_010 Hb_002301_260--Hb_019813_010 Hb_002301_260--Hb_020665_030 Hb_003656_180 Hb_003656_180 Hb_002301_260--Hb_003656_180 Hb_002301_260--Hb_003847_120 Hb_002150_030 Hb_002150_030 Hb_007108_030--Hb_002150_030 Hb_009411_010 Hb_009411_010 Hb_007108_030--Hb_009411_010 Hb_001797_050 Hb_001797_050 Hb_007108_030--Hb_001797_050 Hb_003428_070 Hb_003428_070 Hb_007108_030--Hb_003428_070 Hb_003506_080 Hb_003506_080 Hb_007108_030--Hb_003506_080 Hb_001866_110 Hb_001866_110 Hb_007108_030--Hb_001866_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
72.5293 72.3613 34.765 37.3766 147.919 158.687
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.8241 53.6257 51.1188 58.2922 58.8941

CAGE analysis