Hb_000953_130

Information

Type -
Description -
Location Contig953: 134349-136199
Sequence    

Annotation

kegg
ID cit:102610293
description fructose-bisphosphate aldolase cytoplasmic isozyme-like
nr
ID XP_012066441.1
description PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme [Jatropha curcas]
swissprot
ID P17784
description Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2
trembl
ID A0A067L654
description Fructose-bisphosphate aldolase OS=Jatropha curcas GN=JCGZ_23623 PE=3 SV=1
Gene Ontology
ID GO:0005739
description fructose-bisphosphate cytoplasmic isozyme

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63468: 133390-136256 , PASA_asmbl_63469: 133849-134057 , PASA_asmbl_63470: 133552-133737
cDNA
(Sanger)
(ID:Location)		 003_G14.ab1: 133422-135659 , 010_D08.ab1: 133397-135478 , 013_K04.ab1: 133422-135569 , 017_E04.ab1: 133422-135560 , 018_L03.ab1: 133422-135614 , 019_A15.ab1: 133422-135541 , 024_N17.ab1: 133390-135374 , 032_M20.ab1: 133422-135423 , 035_D01.ab1: 133390-135587 , 047_L11.ab1: 133390-135574

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000953_130 0.0 - - PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme [Jatropha curcas]
2 Hb_007926_050 0.1057919154 - - PREDICTED: probable CCR4-associated factor 1 homolog 11 [Jatropha curcas]
3 Hb_000748_030 0.1128005811 - - ATP binding protein, putative [Ricinus communis]
4 Hb_000384_070 0.113943801 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000913_040 0.1176246632 - - Methyltransferase-related protein, putative [Theobroma cacao]
6 Hb_019181_030 0.1192645412 - - PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 6-like [Pyrus x bretschneideri]
7 Hb_005993_010 0.1220293828 - - PREDICTED: protein transport protein SEC13 homolog B [Jatropha curcas]
8 Hb_000402_130 0.1229908334 - - PREDICTED: AP-1 complex subunit mu-2 [Jatropha curcas]
9 Hb_002781_030 0.1231567181 - - protein binding protein, putative [Ricinus communis]
10 Hb_005535_080 0.1231663351 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
11 Hb_000258_240 0.1237253006 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
12 Hb_001609_040 0.1256685405 - - hypothetical protein POPTR_0017s05650g [Populus trichocarpa]
13 Hb_002133_020 0.1270407668 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001051_070 0.1281044178 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
15 Hb_000152_600 0.1284246198 - - PREDICTED: protein jagunal homolog 1 [Jatropha curcas]
16 Hb_012651_010 0.130278186 - - PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas]
17 Hb_000359_090 0.1309252072 - - PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial-like [Malus domestica]
18 Hb_000023_300 0.1311011853 - - Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
19 Hb_000062_090 0.1319057615 - - PREDICTED: uncharacterized protein LOC105644743 isoform X2 [Jatropha curcas]
20 Hb_000705_230 0.1362067865 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000953_130 Hb_000953_130 Hb_007926_050 Hb_007926_050 Hb_000953_130--Hb_007926_050 Hb_000748_030 Hb_000748_030 Hb_000953_130--Hb_000748_030 Hb_000384_070 Hb_000384_070 Hb_000953_130--Hb_000384_070 Hb_000913_040 Hb_000913_040 Hb_000953_130--Hb_000913_040 Hb_019181_030 Hb_019181_030 Hb_000953_130--Hb_019181_030 Hb_005993_010 Hb_005993_010 Hb_000953_130--Hb_005993_010 Hb_001189_040 Hb_001189_040 Hb_007926_050--Hb_001189_040 Hb_007926_050--Hb_000384_070 Hb_002133_020 Hb_002133_020 Hb_007926_050--Hb_002133_020 Hb_002045_070 Hb_002045_070 Hb_007926_050--Hb_002045_070 Hb_033594_080 Hb_033594_080 Hb_007926_050--Hb_033594_080 Hb_000853_200 Hb_000853_200 Hb_000748_030--Hb_000853_200 Hb_000477_100 Hb_000477_100 Hb_000748_030--Hb_000477_100 Hb_001454_230 Hb_001454_230 Hb_000748_030--Hb_001454_230 Hb_004137_020 Hb_004137_020 Hb_000748_030--Hb_004137_020 Hb_003305_040 Hb_003305_040 Hb_000748_030--Hb_003305_040 Hb_003529_030 Hb_003529_030 Hb_000748_030--Hb_003529_030 Hb_002995_050 Hb_002995_050 Hb_000384_070--Hb_002995_050 Hb_002042_150 Hb_002042_150 Hb_000384_070--Hb_002042_150 Hb_001489_110 Hb_001489_110 Hb_000384_070--Hb_001489_110 Hb_000384_070--Hb_002045_070 Hb_004607_090 Hb_004607_090 Hb_000384_070--Hb_004607_090 Hb_000384_070--Hb_002133_020 Hb_000580_100 Hb_000580_100 Hb_000913_040--Hb_000580_100 Hb_000116_560 Hb_000116_560 Hb_000913_040--Hb_000116_560 Hb_007390_020 Hb_007390_020 Hb_000913_040--Hb_007390_020 Hb_011671_480 Hb_011671_480 Hb_000913_040--Hb_011671_480 Hb_001584_260 Hb_001584_260 Hb_000913_040--Hb_001584_260 Hb_013394_050 Hb_013394_050 Hb_019181_030--Hb_013394_050 Hb_000152_600 Hb_000152_600 Hb_019181_030--Hb_000152_600 Hb_019181_030--Hb_007390_020 Hb_010368_050 Hb_010368_050 Hb_019181_030--Hb_010368_050 Hb_001609_040 Hb_001609_040 Hb_019181_030--Hb_001609_040 Hb_000197_020 Hb_000197_020 Hb_019181_030--Hb_000197_020 Hb_005993_010--Hb_001609_040 Hb_185830_060 Hb_185830_060 Hb_005993_010--Hb_185830_060 Hb_005993_010--Hb_000152_600 Hb_004055_120 Hb_004055_120 Hb_005993_010--Hb_004055_120 Hb_000069_640 Hb_000069_640 Hb_005993_010--Hb_000069_640 Hb_000705_230 Hb_000705_230 Hb_005993_010--Hb_000705_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
120.537 125.147 150.276 452.247 101.943 81.4367
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
80.2019 213.857 148.389 150.108 99.3898

CAGE analysis