Hb_000958_140

Information

Type -
Description -
Location Contig958: 126299-130162
Sequence    

Annotation

kegg
ID rcu:RCOM_0968100
description hypothetical protein
nr
ID XP_012065579.1
description PREDICTED: uncharacterized protein LOC105628714 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LG09
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16772 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63597: 126390-126567 , PASA_asmbl_63598: 127486-127648
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000958_140 0.0 - - PREDICTED: uncharacterized protein LOC105628714 [Jatropha curcas]
2 Hb_000975_040 0.0342954346 - - hypothetical protein CICLE_v10028249mg [Citrus clementina]
3 Hb_001047_220 0.0551842322 - - PREDICTED: F-box protein SKIP17-like [Jatropha curcas]
4 Hb_001369_130 0.0614583466 - - PREDICTED: autophagy-related protein 3 isoform X1 [Jatropha curcas]
5 Hb_138596_010 0.0640459506 - - PREDICTED: BTB/POZ domain-containing protein At2g13690 [Jatropha curcas]
6 Hb_001409_020 0.0668845915 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105638648 [Jatropha curcas]
7 Hb_001379_110 0.067211817 - - PREDICTED: sec1 family domain-containing protein MIP3 [Jatropha curcas]
8 Hb_014361_070 0.0684400281 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
9 Hb_012395_140 0.0691584532 - - PREDICTED: uncharacterized protein LOC105638411 [Jatropha curcas]
10 Hb_000343_250 0.0698300656 - - PREDICTED: protein CASC3 [Jatropha curcas]
11 Hb_000462_060 0.0709245921 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105642316 isoform X2 [Jatropha curcas]
12 Hb_000484_030 0.0711398455 - - PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Jatropha curcas]
13 Hb_021409_040 0.071583511 - - PREDICTED: FAS-associated factor 2 [Jatropha curcas]
14 Hb_005993_050 0.0717706006 - - Protein AFR, putative [Ricinus communis]
15 Hb_006634_070 0.0722202944 - - PREDICTED: calcium-dependent protein kinase 13 [Jatropha curcas]
16 Hb_002732_040 0.07323493 - - PREDICTED: uncharacterized protein LOC105628163 isoform X1 [Jatropha curcas]
17 Hb_000327_270 0.0741393774 - - PREDICTED: leukocyte receptor cluster member 8 homolog isoform X1 [Jatropha curcas]
18 Hb_123903_010 0.0742975447 transcription factor TF Family: IWS1 conserved hypothetical protein [Ricinus communis]
19 Hb_004619_030 0.0744555568 - - PREDICTED: uncharacterized protein LOC105633364 isoform X1 [Jatropha curcas]
20 Hb_000347_070 0.0748360304 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000958_140 Hb_000958_140 Hb_000975_040 Hb_000975_040 Hb_000958_140--Hb_000975_040 Hb_001047_220 Hb_001047_220 Hb_000958_140--Hb_001047_220 Hb_001369_130 Hb_001369_130 Hb_000958_140--Hb_001369_130 Hb_138596_010 Hb_138596_010 Hb_000958_140--Hb_138596_010 Hb_001409_020 Hb_001409_020 Hb_000958_140--Hb_001409_020 Hb_001379_110 Hb_001379_110 Hb_000958_140--Hb_001379_110 Hb_014361_070 Hb_014361_070 Hb_000975_040--Hb_014361_070 Hb_000975_040--Hb_001369_130 Hb_000696_230 Hb_000696_230 Hb_000975_040--Hb_000696_230 Hb_012395_140 Hb_012395_140 Hb_000975_040--Hb_012395_140 Hb_002835_230 Hb_002835_230 Hb_000975_040--Hb_002835_230 Hb_000462_060 Hb_000462_060 Hb_001047_220--Hb_000462_060 Hb_034432_030 Hb_034432_030 Hb_001047_220--Hb_034432_030 Hb_001047_220--Hb_001379_110 Hb_001047_220--Hb_138596_010 Hb_001047_220--Hb_000975_040 Hb_001369_130--Hb_012395_140 Hb_001369_130--Hb_000462_060 Hb_000789_250 Hb_000789_250 Hb_001369_130--Hb_000789_250 Hb_004267_040 Hb_004267_040 Hb_001369_130--Hb_004267_040 Hb_002267_140 Hb_002267_140 Hb_138596_010--Hb_002267_140 Hb_008695_110 Hb_008695_110 Hb_138596_010--Hb_008695_110 Hb_005993_050 Hb_005993_050 Hb_138596_010--Hb_005993_050 Hb_000479_220 Hb_000479_220 Hb_138596_010--Hb_000479_220 Hb_002843_120 Hb_002843_120 Hb_138596_010--Hb_002843_120 Hb_000343_250 Hb_000343_250 Hb_138596_010--Hb_000343_250 Hb_010618_010 Hb_010618_010 Hb_001409_020--Hb_010618_010 Hb_001248_060 Hb_001248_060 Hb_001409_020--Hb_001248_060 Hb_013399_100 Hb_013399_100 Hb_001409_020--Hb_013399_100 Hb_167498_010 Hb_167498_010 Hb_001409_020--Hb_167498_010 Hb_008406_200 Hb_008406_200 Hb_001409_020--Hb_008406_200 Hb_007576_110 Hb_007576_110 Hb_001409_020--Hb_007576_110 Hb_001379_110--Hb_034432_030 Hb_001379_110--Hb_000975_040 Hb_000544_010 Hb_000544_010 Hb_001379_110--Hb_000544_010 Hb_027380_140 Hb_027380_140 Hb_001379_110--Hb_027380_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.91054 8.14016 6.32337 7.48441 9.90232 7.5274
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.38214 5.9849 8.1206 7.20426 7.86475

CAGE analysis