Hb_000960_120

Information

Type -
Description -
Location Contig960: 127324-133188
Sequence    

Annotation

kegg
ID rcu:RCOM_1324350
description cell division cycle, putative
nr
ID XP_012090941.1
description PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
swissprot
ID Q9SZA4
description Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-1 PE=1 SV=1
trembl
ID A0A067JP69
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00582 PE=4 SV=1
Gene Ontology
ID GO:0005515
description cell division cycle cofactor of apc complex-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000960_120 0.0 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
2 Hb_013344_010 0.1077386971 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
3 Hb_001761_010 0.1108431818 - - PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
4 Hb_022092_040 0.1163200382 - - PREDICTED: serine/arginine repetitive matrix protein 1 [Jatropha curcas]
5 Hb_002811_210 0.1253699099 - - PREDICTED: serine/threonine-protein kinase Nek1 isoform X1 [Jatropha curcas]
6 Hb_006060_010 0.1292872272 - - PREDICTED: cyclin-A2-2-like [Jatropha curcas]
7 Hb_008406_100 0.1296574731 - - PREDICTED: protein TPX2 isoform X2 [Jatropha curcas]
8 Hb_012753_150 0.1380778244 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]
9 Hb_000936_030 0.1398369459 - - hypothetical protein RCOM_0615680 [Ricinus communis]
10 Hb_000028_530 0.1427886011 - - Protein regulator of cytokinesis, putative [Ricinus communis]
11 Hb_024973_020 0.1428789133 - - Protein regulator of cytokinesis, putative [Ricinus communis]
12 Hb_000260_610 0.1447475558 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
13 Hb_000365_210 0.1459578634 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
14 Hb_002232_310 0.1467105211 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
15 Hb_004963_020 0.1483147849 - - PREDICTED: patellin-4 [Populus euphratica]
16 Hb_004102_090 0.1499049421 transcription factor TF Family: CPP hypothetical protein JCGZ_06186 [Jatropha curcas]
17 Hb_002205_180 0.1523580546 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
18 Hb_028487_120 0.1529097318 - - PREDICTED: HMG-Y-related protein B-like [Jatropha curcas]
19 Hb_001454_180 0.1568631987 - - PREDICTED: uncharacterized protein LOC105643432 [Jatropha curcas]
20 Hb_011360_130 0.157441326 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000960_120 Hb_000960_120 Hb_013344_010 Hb_013344_010 Hb_000960_120--Hb_013344_010 Hb_001761_010 Hb_001761_010 Hb_000960_120--Hb_001761_010 Hb_022092_040 Hb_022092_040 Hb_000960_120--Hb_022092_040 Hb_002811_210 Hb_002811_210 Hb_000960_120--Hb_002811_210 Hb_006060_010 Hb_006060_010 Hb_000960_120--Hb_006060_010 Hb_008406_100 Hb_008406_100 Hb_000960_120--Hb_008406_100 Hb_000260_610 Hb_000260_610 Hb_013344_010--Hb_000260_610 Hb_013344_010--Hb_006060_010 Hb_001329_010 Hb_001329_010 Hb_013344_010--Hb_001329_010 Hb_000656_320 Hb_000656_320 Hb_013344_010--Hb_000656_320 Hb_013344_010--Hb_008406_100 Hb_012753_150 Hb_012753_150 Hb_001761_010--Hb_012753_150 Hb_000028_530 Hb_000028_530 Hb_001761_010--Hb_000028_530 Hb_000365_210 Hb_000365_210 Hb_001761_010--Hb_000365_210 Hb_002232_310 Hb_002232_310 Hb_001761_010--Hb_002232_310 Hb_024973_020 Hb_024973_020 Hb_001761_010--Hb_024973_020 Hb_007545_110 Hb_007545_110 Hb_022092_040--Hb_007545_110 Hb_022092_040--Hb_001761_010 Hb_028487_120 Hb_028487_120 Hb_022092_040--Hb_028487_120 Hb_022092_040--Hb_000260_610 Hb_002218_050 Hb_002218_050 Hb_022092_040--Hb_002218_050 Hb_004635_020 Hb_004635_020 Hb_002811_210--Hb_004635_020 Hb_002811_210--Hb_000028_530 Hb_000265_100 Hb_000265_100 Hb_002811_210--Hb_000265_100 Hb_010021_060 Hb_010021_060 Hb_002811_210--Hb_010021_060 Hb_000936_030 Hb_000936_030 Hb_002811_210--Hb_000936_030 Hb_006060_010--Hb_012753_150 Hb_006060_010--Hb_000260_610 Hb_003878_060 Hb_003878_060 Hb_006060_010--Hb_003878_060 Hb_003119_040 Hb_003119_040 Hb_006060_010--Hb_003119_040 Hb_005162_130 Hb_005162_130 Hb_008406_100--Hb_005162_130 Hb_002007_280 Hb_002007_280 Hb_008406_100--Hb_002007_280 Hb_000345_410 Hb_000345_410 Hb_008406_100--Hb_000345_410 Hb_008406_100--Hb_024973_020 Hb_008406_100--Hb_000365_210 Hb_001501_070 Hb_001501_070 Hb_008406_100--Hb_001501_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.470917 1.38838 16.0607 5.10638 0.84548 0.334925
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0921287 0.217492 0.0923695 0.896467 0.669607

CAGE analysis