Hb_000962_040

Information

Type -
Description -
Location Contig962: 94206-101106
Sequence    

Annotation

kegg
ID rcu:RCOM_0503950
description heat shock protein binding protein, putative
nr
ID XP_002530712.1
description heat shock protein binding protein, putative [Ricinus communis]
swissprot
ID Q7M9T3
description Chaperone protein DnaJ OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=dnaJ PE=3 SV=1
trembl
ID B9SXJ3
description Heat shock protein binding protein, putative OS=Ricinus communis GN=RCOM_0503950 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63750: 94272-101040
cDNA
(Sanger)
(ID:Location)		 033_O16.ab1: 94630-101040

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000962_040 0.0 - - heat shock protein binding protein, putative [Ricinus communis]
2 Hb_004324_270 0.0827957371 - - PREDICTED: mitochondrial carrier protein MTM1 [Jatropha curcas]
3 Hb_000614_220 0.0844050493 - - PREDICTED: uncharacterized protein LOC105644756 [Jatropha curcas]
4 Hb_027654_060 0.0860753002 - - RecName: Full=Probable pyridoxal 5'-phosphate synthase subunit PDX1; Short=PLP synthase subunit PDX1; AltName: Full=Ethylene-inducible protein HEVER [Hevea brasiliensis]
5 Hb_011909_100 0.0876277085 - - conserved hypothetical protein [Ricinus communis]
6 Hb_028486_030 0.08955783 - - hypothetical protein JCGZ_12706 [Jatropha curcas]
7 Hb_000853_190 0.0900936427 - - mitochondrial carrier protein, putative [Ricinus communis]
8 Hb_002799_110 0.0905622391 - - PREDICTED: probable protein phosphatase 2C 60 [Jatropha curcas]
9 Hb_012675_050 0.092815796 - - conserved hypothetical protein [Ricinus communis]
10 Hb_017225_020 0.093222822 - - PREDICTED: protein BRICK 1 [Gossypium raimondii]
11 Hb_007576_170 0.0943641912 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005446_010 0.0951336037 - - PREDICTED: zinc finger protein 830 [Jatropha curcas]
13 Hb_001776_160 0.0969042642 - - 20S proteasome alpha subunit G1 [Theobroma cacao]
14 Hb_000680_140 0.0969509695 - - PREDICTED: uncharacterized protein LOC105631472 isoform X1 [Jatropha curcas]
15 Hb_028872_080 0.0976931009 - - PREDICTED: adenylate kinase 4-like [Jatropha curcas]
16 Hb_001218_040 0.098181332 - - Mitochondrial substrate carrier family protein [Theobroma cacao]
17 Hb_001268_420 0.09841587 - - PREDICTED: uncharacterized protein LOC105630158 [Jatropha curcas]
18 Hb_019263_020 0.0992942769 - - PREDICTED: pentatricopeptide repeat-containing protein At2g35030, mitochondrial [Jatropha curcas]
19 Hb_006831_120 0.0999270636 - - PREDICTED: uncharacterized protein LOC105642121 isoform X1 [Jatropha curcas]
20 Hb_000327_060 0.1002203874 - - PREDICTED: uncharacterized protein LOC105635258 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000962_040 Hb_000962_040 Hb_004324_270 Hb_004324_270 Hb_000962_040--Hb_004324_270 Hb_000614_220 Hb_000614_220 Hb_000962_040--Hb_000614_220 Hb_027654_060 Hb_027654_060 Hb_000962_040--Hb_027654_060 Hb_011909_100 Hb_011909_100 Hb_000962_040--Hb_011909_100 Hb_028486_030 Hb_028486_030 Hb_000962_040--Hb_028486_030 Hb_000853_190 Hb_000853_190 Hb_000962_040--Hb_000853_190 Hb_011457_050 Hb_011457_050 Hb_004324_270--Hb_011457_050 Hb_000046_050 Hb_000046_050 Hb_004324_270--Hb_000046_050 Hb_005446_010 Hb_005446_010 Hb_004324_270--Hb_005446_010 Hb_002408_020 Hb_002408_020 Hb_004324_270--Hb_002408_020 Hb_003768_030 Hb_003768_030 Hb_004324_270--Hb_003768_030 Hb_002183_060 Hb_002183_060 Hb_004324_270--Hb_002183_060 Hb_002799_110 Hb_002799_110 Hb_000614_220--Hb_002799_110 Hb_000614_220--Hb_027654_060 Hb_000614_160 Hb_000614_160 Hb_000614_220--Hb_000614_160 Hb_000510_290 Hb_000510_290 Hb_000614_220--Hb_000510_290 Hb_012675_050 Hb_012675_050 Hb_000614_220--Hb_012675_050 Hb_012114_070 Hb_012114_070 Hb_000614_220--Hb_012114_070 Hb_082609_010 Hb_082609_010 Hb_027654_060--Hb_082609_010 Hb_027654_060--Hb_002799_110 Hb_003020_220 Hb_003020_220 Hb_027654_060--Hb_003020_220 Hb_027654_060--Hb_028486_030 Hb_011909_100--Hb_012675_050 Hb_001083_020 Hb_001083_020 Hb_011909_100--Hb_001083_020 Hb_001775_110 Hb_001775_110 Hb_011909_100--Hb_001775_110 Hb_008554_070 Hb_008554_070 Hb_011909_100--Hb_008554_070 Hb_103118_010 Hb_103118_010 Hb_011909_100--Hb_103118_010 Hb_000680_140 Hb_000680_140 Hb_028486_030--Hb_000680_140 Hb_004846_090 Hb_004846_090 Hb_028486_030--Hb_004846_090 Hb_007220_010 Hb_007220_010 Hb_028486_030--Hb_007220_010 Hb_026549_040 Hb_026549_040 Hb_028486_030--Hb_026549_040 Hb_028486_030--Hb_012675_050 Hb_000436_130 Hb_000436_130 Hb_000853_190--Hb_000436_130 Hb_011512_040 Hb_011512_040 Hb_000853_190--Hb_011512_040 Hb_000853_190--Hb_000614_220 Hb_000853_190--Hb_027654_060 Hb_002871_190 Hb_002871_190 Hb_000853_190--Hb_002871_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.6516 7.30283 16.4231 9.32556 9.97802 15.3718
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.5296 38.8506 33.8253 10.7959 20.734

CAGE analysis