Hb_000962_060

Information

Type -
Description -
Location Contig962: 133642-134300
Sequence    

Annotation

kegg
ID rcu:RCOM_0503810
description hypothetical protein
nr
ID XP_012087768.1
description PREDICTED: uncharacterized protein LOC105646517 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JX98
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25541 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63754: 133609-134287
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000962_060 0.0 - - PREDICTED: uncharacterized protein LOC105646517 [Jatropha curcas]
2 Hb_001052_020 0.0774845435 - - hypothetical protein JCGZ_26487 [Jatropha curcas]
3 Hb_009545_060 0.087900352 - - PREDICTED: uncharacterized protein LOC105632005 [Jatropha curcas]
4 Hb_000062_280 0.0998181344 - - plant mitotic spindle assembly checkpoint protein mad2, putative [Ricinus communis]
5 Hb_000089_090 0.1013204492 - - hypothetical protein POPTR_0019s12670g [Populus trichocarpa]
6 Hb_012092_040 0.1104378999 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
7 Hb_001247_060 0.1113570706 - - zinc finger protein, putative [Ricinus communis]
8 Hb_089140_070 0.1129392907 - - PREDICTED: uncharacterized protein LOC105637961 [Jatropha curcas]
9 Hb_059502_010 0.1188956119 - - PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Jatropha curcas]
10 Hb_000531_010 0.1192502386 transcription factor TF Family: G2-like hypothetical protein POPTR_0018s14830g [Populus trichocarpa]
11 Hb_180864_010 0.1215394602 - - hypothetical protein B456_010G097000 [Gossypium raimondii]
12 Hb_004598_020 0.1224560139 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
13 Hb_000035_230 0.1252968599 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
14 Hb_009113_020 0.1259014454 - - PREDICTED: probable polygalacturonase non-catalytic subunit JP650 [Jatropha curcas]
15 Hb_000977_190 0.126167659 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002686_320 0.1283876888 - - syntaxin, putative [Ricinus communis]
17 Hb_001242_170 0.1320168631 - - conserved hypothetical protein [Ricinus communis]
18 Hb_085600_010 0.1349228495 - - PREDICTED: peroxidase 24-like [Jatropha curcas]
19 Hb_165110_010 0.1357391528 - - PREDICTED: kunitz-type elastase inhibitor BrEI-like [Jatropha curcas]
20 Hb_002025_280 0.135932108 - - PREDICTED: uncharacterized protein LOC105634201 [Jatropha curcas]

Gene co-expression network

sample Hb_000962_060 Hb_000962_060 Hb_001052_020 Hb_001052_020 Hb_000962_060--Hb_001052_020 Hb_009545_060 Hb_009545_060 Hb_000962_060--Hb_009545_060 Hb_000062_280 Hb_000062_280 Hb_000962_060--Hb_000062_280 Hb_000089_090 Hb_000089_090 Hb_000962_060--Hb_000089_090 Hb_012092_040 Hb_012092_040 Hb_000962_060--Hb_012092_040 Hb_001247_060 Hb_001247_060 Hb_000962_060--Hb_001247_060 Hb_001052_020--Hb_000062_280 Hb_165110_010 Hb_165110_010 Hb_001052_020--Hb_165110_010 Hb_089140_070 Hb_089140_070 Hb_001052_020--Hb_089140_070 Hb_000506_050 Hb_000506_050 Hb_001052_020--Hb_000506_050 Hb_001052_020--Hb_012092_040 Hb_009113_020 Hb_009113_020 Hb_009545_060--Hb_009113_020 Hb_002686_320 Hb_002686_320 Hb_009545_060--Hb_002686_320 Hb_000035_230 Hb_000035_230 Hb_009545_060--Hb_000035_230 Hb_000701_020 Hb_000701_020 Hb_009545_060--Hb_000701_020 Hb_000538_290 Hb_000538_290 Hb_009545_060--Hb_000538_290 Hb_000853_250 Hb_000853_250 Hb_000062_280--Hb_000853_250 Hb_000062_280--Hb_165110_010 Hb_001141_440 Hb_001141_440 Hb_000062_280--Hb_001141_440 Hb_000062_280--Hb_000506_050 Hb_000089_090--Hb_001247_060 Hb_000089_090--Hb_012092_040 Hb_000089_090--Hb_000035_230 Hb_059502_010 Hb_059502_010 Hb_000089_090--Hb_059502_010 Hb_003464_010 Hb_003464_010 Hb_000089_090--Hb_003464_010 Hb_012092_040--Hb_001247_060 Hb_012092_040--Hb_089140_070 Hb_012092_040--Hb_000035_230 Hb_012092_040--Hb_003464_010 Hb_000390_010 Hb_000390_010 Hb_012092_040--Hb_000390_010 Hb_001247_060--Hb_000035_230 Hb_001247_060--Hb_059502_010 Hb_007304_020 Hb_007304_020 Hb_001247_060--Hb_007304_020 Hb_000531_010 Hb_000531_010 Hb_001247_060--Hb_000531_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 12.934 19.9653 0.04524 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.21323 0.842302

CAGE analysis