Hb_000964_030

Information

Type -
Description -
Location Contig964: 28036-32293
Sequence    

Annotation

kegg
ID tcc:TCM_005890
description ADP/ATP carrier 2
nr
ID XP_007052542.1
description ADP/ATP carrier 2 [Theobroma cacao]
swissprot
ID O22342
description ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1
trembl
ID A0A061DVB4
description ADP/ATP carrier 2 OS=Theobroma cacao GN=TCM_005890 PE=3 SV=1
Gene Ontology
ID GO:0005743
description carrier protein mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63845: 28166-32198 , PASA_asmbl_63846: 28288-28680
cDNA
(Sanger)
(ID:Location)		 032_I23.ab1: 28191-30921

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000964_030 0.0 - - ADP/ATP carrier 2 [Theobroma cacao]
2 Hb_005653_070 0.0556267547 - - K+ transport growth defect-like protein [Hevea brasiliensis]
3 Hb_038574_010 0.0715046651 - - PREDICTED: vacuolar cation/proton exchanger 3-like isoform X2 [Populus euphratica]
4 Hb_002119_130 0.0818213667 - - PREDICTED: uncharacterized protein LOC105634169 [Jatropha curcas]
5 Hb_000252_100 0.0839907002 - - PREDICTED: AP-1 complex subunit mu-2 [Jatropha curcas]
6 Hb_007218_120 0.0871195722 - - PREDICTED: pentatricopeptide repeat-containing protein At1g51965, mitochondrial [Jatropha curcas]
7 Hb_053709_050 0.0895658325 - - PREDICTED: nudix hydrolase 23, chloroplastic isoform X2 [Jatropha curcas]
8 Hb_002110_100 0.0896743179 - - PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic [Jatropha curcas]
9 Hb_004429_020 0.0911506283 - - PREDICTED: magnesium transporter MRS2-5 [Jatropha curcas]
10 Hb_012305_130 0.0911908493 - - PREDICTED: GTP-binding protein SAR1A [Jatropha curcas]
11 Hb_000723_230 0.0933652752 - - hypothetical protein CISIN_1g017413mg [Citrus sinensis]
12 Hb_000454_090 0.0935870986 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like [Tarenaya hassleriana]
13 Hb_012262_030 0.0939165482 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
14 Hb_001016_100 0.0949567493 - - PREDICTED: V-type proton ATPase subunit E-like [Pyrus x bretschneideri]
15 Hb_000069_640 0.0949745501 - - PREDICTED: tubulin gamma-1 chain [Vitis vinifera]
16 Hb_003360_040 0.0963834877 - - PREDICTED: uncharacterized protein LOC105634704 [Jatropha curcas]
17 Hb_003305_040 0.097980336 - - AP47/50p mRNA family protein [Populus trichocarpa]
18 Hb_000220_100 0.0980924821 - - PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950 [Jatropha curcas]
19 Hb_000173_410 0.0986003616 - - PREDICTED: BI1-like protein [Jatropha curcas]
20 Hb_000140_090 0.0996507774 - - PREDICTED: C-terminal binding protein AN [Jatropha curcas]

Gene co-expression network

sample Hb_000964_030 Hb_000964_030 Hb_005653_070 Hb_005653_070 Hb_000964_030--Hb_005653_070 Hb_038574_010 Hb_038574_010 Hb_000964_030--Hb_038574_010 Hb_002119_130 Hb_002119_130 Hb_000964_030--Hb_002119_130 Hb_000252_100 Hb_000252_100 Hb_000964_030--Hb_000252_100 Hb_007218_120 Hb_007218_120 Hb_000964_030--Hb_007218_120 Hb_053709_050 Hb_053709_050 Hb_000964_030--Hb_053709_050 Hb_005653_070--Hb_038574_010 Hb_189216_010 Hb_189216_010 Hb_005653_070--Hb_189216_010 Hb_001728_040 Hb_001728_040 Hb_005653_070--Hb_001728_040 Hb_005653_070--Hb_007218_120 Hb_000069_640 Hb_000069_640 Hb_005653_070--Hb_000069_640 Hb_038574_010--Hb_000069_640 Hb_008748_030 Hb_008748_030 Hb_038574_010--Hb_008748_030 Hb_000753_230 Hb_000753_230 Hb_038574_010--Hb_000753_230 Hb_003913_130 Hb_003913_130 Hb_038574_010--Hb_003913_130 Hb_002119_130--Hb_007218_120 Hb_003360_040 Hb_003360_040 Hb_002119_130--Hb_003360_040 Hb_000920_200 Hb_000920_200 Hb_002119_130--Hb_000920_200 Hb_001218_030 Hb_001218_030 Hb_002119_130--Hb_001218_030 Hb_000173_410 Hb_000173_410 Hb_002119_130--Hb_000173_410 Hb_000454_090 Hb_000454_090 Hb_002119_130--Hb_000454_090 Hb_000252_100--Hb_000454_090 Hb_000252_100--Hb_000173_410 Hb_003305_040 Hb_003305_040 Hb_000252_100--Hb_003305_040 Hb_000140_380 Hb_000140_380 Hb_000252_100--Hb_000140_380 Hb_000060_050 Hb_000060_050 Hb_000252_100--Hb_000060_050 Hb_000505_150 Hb_000505_150 Hb_000252_100--Hb_000505_150 Hb_007218_120--Hb_000173_410 Hb_002660_170 Hb_002660_170 Hb_007218_120--Hb_002660_170 Hb_000110_140 Hb_000110_140 Hb_007218_120--Hb_000110_140 Hb_007218_120--Hb_003360_040 Hb_003376_180 Hb_003376_180 Hb_007218_120--Hb_003376_180 Hb_001633_090 Hb_001633_090 Hb_053709_050--Hb_001633_090 Hb_007850_030 Hb_007850_030 Hb_053709_050--Hb_007850_030 Hb_006637_030 Hb_006637_030 Hb_053709_050--Hb_006637_030 Hb_000603_160 Hb_000603_160 Hb_053709_050--Hb_000603_160 Hb_002693_030 Hb_002693_030 Hb_053709_050--Hb_002693_030 Hb_053709_050--Hb_189216_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.5349 58.551 85.7987 121.155 17.6504 30.3524
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
64.1247 79.0785 95.9441 68.1027 65.8874

CAGE analysis