Hb_000972_010

Information

Type -
Description -
Location Contig972: 32346-40447
Sequence    

Annotation

kegg
ID rcu:RCOM_0341920
description kinesin, putative
nr
ID XP_012080843.1
description PREDICTED: kinesin KP1 [Jatropha curcas]
swissprot
ID O81635
description Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2
trembl
ID A0A067K3C7
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_16207 PE=3 SV=1
Gene Ontology
ID GO:0015630
description kinesin kp1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63964: 38592-39210
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000972_010 0.0 - - PREDICTED: kinesin KP1 [Jatropha curcas]
2 Hb_004871_050 0.1062953273 - - hypothetical protein F383_22684 [Gossypium arboreum]
3 Hb_017124_020 0.1502002767 - - hypothetical protein PRUPE_ppa015539mg [Prunus persica]
4 Hb_000103_110 0.150419586 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Jatropha curcas]
5 Hb_000120_650 0.1580211065 - - PREDICTED: proton-coupled amino acid transporter 3 [Jatropha curcas]
6 Hb_000120_120 0.1765225252 - - PREDICTED: phosphoinositide phospholipase C 2 [Jatropha curcas]
7 Hb_000157_040 0.1771433389 - - PREDICTED: cycloartenol-C-24-methyltransferase [Jatropha curcas]
8 Hb_003599_070 0.1775849173 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_004324_050 0.1777705776 - - PREDICTED: spermine synthase [Jatropha curcas]
10 Hb_018954_010 0.1855293781 - - -
11 Hb_004429_070 0.1858540771 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
12 Hb_000193_240 0.1866434876 - - hypothetical protein CISIN_1g0449881mg, partial [Citrus sinensis]
13 Hb_013818_060 0.1898005586 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
14 Hb_000249_090 0.1903629524 - - PREDICTED: triacylglycerol lipase SDP1 [Jatropha curcas]
15 Hb_001741_040 0.191329301 rubber biosynthesis Gene Name: REF3 REF-like stress related protein 1 [Hevea brasiliensis]
16 Hb_001268_400 0.1941188002 - - PREDICTED: uncharacterized protein LOC104583970 [Brachypodium distachyon]
17 Hb_000477_080 0.195199889 - - PREDICTED: 3-ketoacyl-CoA synthase 11 [Jatropha curcas]
18 Hb_000368_060 0.1954743146 - - thioredoxin H-type 6 [Hevea brasiliensis]
19 Hb_011360_080 0.1959488926 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
20 Hb_000172_570 0.1972458921 - - PREDICTED: uncharacterized protein LOC105636518 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000972_010 Hb_000972_010 Hb_004871_050 Hb_004871_050 Hb_000972_010--Hb_004871_050 Hb_017124_020 Hb_017124_020 Hb_000972_010--Hb_017124_020 Hb_000103_110 Hb_000103_110 Hb_000972_010--Hb_000103_110 Hb_000120_650 Hb_000120_650 Hb_000972_010--Hb_000120_650 Hb_000120_120 Hb_000120_120 Hb_000972_010--Hb_000120_120 Hb_000157_040 Hb_000157_040 Hb_000972_010--Hb_000157_040 Hb_004871_050--Hb_000120_650 Hb_000249_130 Hb_000249_130 Hb_004871_050--Hb_000249_130 Hb_004871_050--Hb_017124_020 Hb_004871_050--Hb_000120_120 Hb_001268_400 Hb_001268_400 Hb_004871_050--Hb_001268_400 Hb_017124_020--Hb_000120_650 Hb_000567_250 Hb_000567_250 Hb_017124_020--Hb_000567_250 Hb_027892_010 Hb_027892_010 Hb_017124_020--Hb_027892_010 Hb_000249_090 Hb_000249_090 Hb_017124_020--Hb_000249_090 Hb_000368_060 Hb_000368_060 Hb_000103_110--Hb_000368_060 Hb_004324_050 Hb_004324_050 Hb_000103_110--Hb_004324_050 Hb_000562_040 Hb_000562_040 Hb_000103_110--Hb_000562_040 Hb_000784_030 Hb_000784_030 Hb_000103_110--Hb_000784_030 Hb_000141_030 Hb_000141_030 Hb_000103_110--Hb_000141_030 Hb_000103_110--Hb_000157_040 Hb_000120_650--Hb_000249_090 Hb_000120_650--Hb_027892_010 Hb_002685_090 Hb_002685_090 Hb_000120_650--Hb_002685_090 Hb_013818_060 Hb_013818_060 Hb_000120_650--Hb_013818_060 Hb_000120_120--Hb_013818_060 Hb_000120_120--Hb_027892_010 Hb_000120_120--Hb_000249_130 Hb_000120_120--Hb_000120_650 Hb_000120_120--Hb_000249_090 Hb_099069_010 Hb_099069_010 Hb_000157_040--Hb_099069_010 Hb_000270_410 Hb_000270_410 Hb_000157_040--Hb_000270_410 Hb_000157_040--Hb_004324_050 Hb_000157_040--Hb_002685_090 Hb_000563_560 Hb_000563_560 Hb_000157_040--Hb_000563_560
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
43.3485 0.301679 0.572689 5.5522 24.1136 41.2314
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
123.631 95.0809 380.787 20.9249 3.21133

CAGE analysis