Hb_000976_030

Information

Type -
Description -
Location Contig976: 54938-55329
Sequence    

Annotation

kegg
ID cit:102617954
description molybdenum cofactor sulfurase-like
nr
ID XP_006475316.1
description PREDICTED: molybdenum cofactor sulfurase-like [Citrus sinensis]
swissprot
ID -
description -
trembl
ID M0TNA4
description Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1
Gene Ontology
ID GO:0005622
description molybdenum cofactor sulfurase isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64043: 55004-55262
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000976_030 0.0 - - PREDICTED: molybdenum cofactor sulfurase-like [Citrus sinensis]
2 Hb_000617_170 0.1494227177 - - -
3 Hb_002960_050 0.1724760524 - - PREDICTED: uncharacterized protein LOC105635325 [Jatropha curcas]
4 Hb_178041_010 0.1771100227 - - PREDICTED: signal peptide peptidase-like 2 [Populus euphratica]
5 Hb_051437_010 0.1870630243 - - PREDICTED: calmodulin-interacting protein 111 isoform X2 [Jatropha curcas]
6 Hb_000248_010 0.187129811 - - hypothetical protein PRUPE_ppa008056mg [Prunus persica]
7 Hb_169170_010 0.1896501817 - - PREDICTED: protein disulfide-isomerase 5-1 isoform X2 [Nelumbo nucifera]
8 Hb_009119_020 0.1939176497 - - hypothetical protein CISIN_1g033708mg [Citrus sinensis]
9 Hb_134310_020 0.1945546129 - - PREDICTED: putative cytochrome c oxidase subunit 5C-4-like [Citrus sinensis]
10 Hb_068014_010 0.1969683996 - - hypothetical protein POPTR_0312s00200g, partial [Populus trichocarpa]
11 Hb_000295_100 0.1982932986 - - -
12 Hb_177103_010 0.2026756424 - - PREDICTED: histone H2AX [Elaeis guineensis]
13 Hb_000003_180 0.2076672428 - - conserved hypothetical protein [Ricinus communis]
14 Hb_171788_010 0.208143449 - - hypothetical protein CISIN_1g007892mg [Citrus sinensis]
15 Hb_130134_020 0.2111524584 - - -
16 Hb_007333_040 0.211806288 - - PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max]
17 Hb_005318_020 0.2141020019 - - PREDICTED: lecithin-cholesterol acyltransferase-like 4 isoform X3 [Jatropha curcas]
18 Hb_001427_060 0.215869975 - - -
19 Hb_000808_240 0.2165107441 - - -
20 Hb_002783_060 0.2178211179 - - PREDICTED: uncharacterized protein LOC105635325 [Jatropha curcas]

Gene co-expression network

sample Hb_000976_030 Hb_000976_030 Hb_000617_170 Hb_000617_170 Hb_000976_030--Hb_000617_170 Hb_002960_050 Hb_002960_050 Hb_000976_030--Hb_002960_050 Hb_178041_010 Hb_178041_010 Hb_000976_030--Hb_178041_010 Hb_051437_010 Hb_051437_010 Hb_000976_030--Hb_051437_010 Hb_000248_010 Hb_000248_010 Hb_000976_030--Hb_000248_010 Hb_169170_010 Hb_169170_010 Hb_000976_030--Hb_169170_010 Hb_122567_020 Hb_122567_020 Hb_000617_170--Hb_122567_020 Hb_005933_010 Hb_005933_010 Hb_000617_170--Hb_005933_010 Hb_134310_020 Hb_134310_020 Hb_000617_170--Hb_134310_020 Hb_000617_170--Hb_000248_010 Hb_000617_170--Hb_169170_010 Hb_002960_050--Hb_000248_010 Hb_000295_100 Hb_000295_100 Hb_002960_050--Hb_000295_100 Hb_002783_060 Hb_002783_060 Hb_002960_050--Hb_002783_060 Hb_005965_010 Hb_005965_010 Hb_002960_050--Hb_005965_010 Hb_073559_010 Hb_073559_010 Hb_002960_050--Hb_073559_010 Hb_106005_010 Hb_106005_010 Hb_002960_050--Hb_106005_010 Hb_002742_070 Hb_002742_070 Hb_178041_010--Hb_002742_070 Hb_178041_010--Hb_051437_010 Hb_130134_030 Hb_130134_030 Hb_178041_010--Hb_130134_030 Hb_002815_060 Hb_002815_060 Hb_178041_010--Hb_002815_060 Hb_088428_010 Hb_088428_010 Hb_178041_010--Hb_088428_010 Hb_171788_010 Hb_171788_010 Hb_178041_010--Hb_171788_010 Hb_051424_010 Hb_051424_010 Hb_051437_010--Hb_051424_010 Hb_051437_010--Hb_002742_070 Hb_009119_040 Hb_009119_040 Hb_051437_010--Hb_009119_040 Hb_008029_020 Hb_008029_020 Hb_051437_010--Hb_008029_020 Hb_009119_020 Hb_009119_020 Hb_051437_010--Hb_009119_020 Hb_000248_030 Hb_000248_030 Hb_000248_010--Hb_000248_030 Hb_000248_010--Hb_073559_010 Hb_001235_060 Hb_001235_060 Hb_000248_010--Hb_001235_060 Hb_088065_010 Hb_088065_010 Hb_000248_010--Hb_088065_010 Hb_000248_010--Hb_005933_010 Hb_177103_010 Hb_177103_010 Hb_169170_010--Hb_177103_010 Hb_068014_010 Hb_068014_010 Hb_169170_010--Hb_068014_010 Hb_006198_090 Hb_006198_090 Hb_169170_010--Hb_006198_090 Hb_005318_020 Hb_005318_020 Hb_169170_010--Hb_005318_020 Hb_007447_020 Hb_007447_020 Hb_169170_010--Hb_007447_020 Hb_007188_030 Hb_007188_030 Hb_169170_010--Hb_007188_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.18362 5.51952 0.245371 12.3355 9.40907 55.6453
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.82496 2.39105 1.84028 10.0925 2.63025

CAGE analysis