Hb_000976_360

Information

Type -
Description -
Location Contig976: 293933-296460
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa013160mg
description hypothetical protein
nr
ID XP_012087444.1
description PREDICTED: uncharacterized protein LOC105646237 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JMD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22676 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64095: 294055-296363
cDNA
(Sanger)
(ID:Location)		 027_A10.ab1: 294060-296043

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000976_360 0.0 - - PREDICTED: uncharacterized protein LOC105646237 [Jatropha curcas]
2 Hb_001141_280 0.0805697046 - - PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifera]
3 Hb_000046_290 0.0903013988 - - PREDICTED: tubby-like F-box protein 3 [Tarenaya hassleriana]
4 Hb_027402_070 0.0984516619 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
5 Hb_000963_180 0.0992797089 - - calcium/calmodulin-dependent protein kinase kinase, putative [Ricinus communis]
6 Hb_000224_120 0.0994775967 - - eukaryotic translation initiation factor 1Aa [Hevea brasiliensis]
7 Hb_003551_050 0.0997513435 - - PREDICTED: mitochondrial fission 1 protein A [Jatropha curcas]
8 Hb_009666_040 0.10401998 - - glutathione transferase, putative [Ricinus communis]
9 Hb_000975_300 0.1050362286 - - Rab2 [Hevea brasiliensis]
10 Hb_001862_100 0.1054803567 - - PREDICTED: uncharacterized protein LOC105639799 isoform X2 [Jatropha curcas]
11 Hb_000046_110 0.1071943712 - - PREDICTED: 54S ribosomal protein L39, mitochondrial [Jatropha curcas]
12 Hb_006472_050 0.1093548839 - - PREDICTED: ubiquitin-conjugating enzyme E2 7 isoform X2 [Elaeis guineensis]
13 Hb_000023_340 0.109796421 - - PREDICTED: enhancer of rudimentary homolog [Jatropha curcas]
14 Hb_000753_130 0.1099590366 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
15 Hb_116898_010 0.1103188716 - - PREDICTED: uncharacterized protein LOC105639569 isoform X2 [Jatropha curcas]
16 Hb_001829_060 0.1107462733 - - Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
17 Hb_001575_020 0.111963704 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002471_080 0.1125320537 - - oxidoreductase, putative [Ricinus communis]
19 Hb_000979_230 0.1138305136 - - PREDICTED: protein BCCIP homolog [Jatropha curcas]
20 Hb_000062_340 0.1141580456 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Jatropha curcas]

Gene co-expression network

sample Hb_000976_360 Hb_000976_360 Hb_001141_280 Hb_001141_280 Hb_000976_360--Hb_001141_280 Hb_000046_290 Hb_000046_290 Hb_000976_360--Hb_000046_290 Hb_027402_070 Hb_027402_070 Hb_000976_360--Hb_027402_070 Hb_000963_180 Hb_000963_180 Hb_000976_360--Hb_000963_180 Hb_000224_120 Hb_000224_120 Hb_000976_360--Hb_000224_120 Hb_003551_050 Hb_003551_050 Hb_000976_360--Hb_003551_050 Hb_009666_040 Hb_009666_040 Hb_001141_280--Hb_009666_040 Hb_001829_060 Hb_001829_060 Hb_001141_280--Hb_001829_060 Hb_003018_190 Hb_003018_190 Hb_001141_280--Hb_003018_190 Hb_001862_100 Hb_001862_100 Hb_001141_280--Hb_001862_100 Hb_000239_010 Hb_000239_010 Hb_001141_280--Hb_000239_010 Hb_001109_020 Hb_001109_020 Hb_001141_280--Hb_001109_020 Hb_002471_080 Hb_002471_080 Hb_000046_290--Hb_002471_080 Hb_027625_010 Hb_027625_010 Hb_000046_290--Hb_027625_010 Hb_001775_110 Hb_001775_110 Hb_000046_290--Hb_001775_110 Hb_001360_050 Hb_001360_050 Hb_000046_290--Hb_001360_050 Hb_008544_010 Hb_008544_010 Hb_000046_290--Hb_008544_010 Hb_001191_090 Hb_001191_090 Hb_000046_290--Hb_001191_090 Hb_000753_130 Hb_000753_130 Hb_027402_070--Hb_000753_130 Hb_000377_060 Hb_000377_060 Hb_027402_070--Hb_000377_060 Hb_027402_070--Hb_001141_280 Hb_029866_040 Hb_029866_040 Hb_027402_070--Hb_029866_040 Hb_000975_300 Hb_000975_300 Hb_027402_070--Hb_000975_300 Hb_000023_340 Hb_000023_340 Hb_000963_180--Hb_000023_340 Hb_029866_070 Hb_029866_070 Hb_000963_180--Hb_029866_070 Hb_000046_110 Hb_000046_110 Hb_000963_180--Hb_000046_110 Hb_001461_010 Hb_001461_010 Hb_000963_180--Hb_001461_010 Hb_000963_180--Hb_001829_060 Hb_000963_180--Hb_029866_040 Hb_011457_090 Hb_011457_090 Hb_000224_120--Hb_011457_090 Hb_004336_050 Hb_004336_050 Hb_000224_120--Hb_004336_050 Hb_000975_110 Hb_000975_110 Hb_000224_120--Hb_000975_110 Hb_004374_140 Hb_004374_140 Hb_000224_120--Hb_004374_140 Hb_001307_090 Hb_001307_090 Hb_000224_120--Hb_001307_090 Hb_000224_120--Hb_000963_180 Hb_093458_050 Hb_093458_050 Hb_003551_050--Hb_093458_050 Hb_011953_020 Hb_011953_020 Hb_003551_050--Hb_011953_020 Hb_031862_110 Hb_031862_110 Hb_003551_050--Hb_031862_110 Hb_002603_160 Hb_002603_160 Hb_003551_050--Hb_002603_160 Hb_003551_050--Hb_000753_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
37.3086 4.78351 11.1847 23.8984 19.09 53.289
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
64.5774 85.9233 115.836 34.468 17.4706

CAGE analysis