Hb_000977_080

Information

Type -
Description -
Location Contig977: 58459-59796
Sequence    

Annotation

kegg
ID rcu:RCOM_1076710
description type II inositol 5-phosphatase, putative (EC:3.1.3.36)
nr
ID XP_002514770.1
description type II inositol 5-phosphatase, putative [Ricinus communis]
swissprot
ID Q84W55
description Type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 OS=Arabidopsis thaliana GN=FRA3 PE=1 SV=2
trembl
ID A0A078EZE1
description BnaA07g25340D protein OS=Brassica napus GN=BnaA07g25340D PE=4 SV=1
Gene Ontology
ID GO:0016787
description type ii inositol 5-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000977_080 0.0 - - type II inositol 5-phosphatase, putative [Ricinus communis]
2 Hb_000392_270 0.0594319176 - - PREDICTED: 40S ribosomal protein S9-2 [Jatropha curcas]
3 Hb_003551_020 0.0597560658 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like isoform X1 [Jatropha curcas]
4 Hb_000045_130 0.0605044216 - - 60S acidic ribosomal protein P0A [Hevea brasiliensis]
5 Hb_004645_050 0.0607027192 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
6 Hb_001369_650 0.068837506 - - PREDICTED: chloride conductance regulatory protein ICln [Jatropha curcas]
7 Hb_000019_230 0.0702831711 - - PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Jatropha curcas]
8 Hb_000866_300 0.0704979024 - - hypothetical protein CICLE_v10023145mg [Citrus clementina]
9 Hb_003878_190 0.0736197485 - - hypothetical protein POPTR_0011s11040g [Populus trichocarpa]
10 Hb_000260_050 0.0757979041 - - PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Jatropha curcas]
11 Hb_001828_090 0.0774510076 - - prohibitin, putative [Ricinus communis]
12 Hb_000376_050 0.0790541065 - - polyadenylate-binding protein, putative [Ricinus communis]
13 Hb_007426_230 0.0790821635 - - hypothetical protein CICLE_v10017932mg [Citrus clementina]
14 Hb_007747_090 0.0813751543 - - PREDICTED: cold-inducible RNA-binding protein [Jatropha curcas]
15 Hb_000928_240 0.0814286591 - - PREDICTED: uncharacterized protein LOC105632515 [Jatropha curcas]
16 Hb_002307_030 0.0820890166 - - 40S ribosomal protein S15D [Hevea brasiliensis]
17 Hb_002603_100 0.0842839088 - - ATATH9, putative [Ricinus communis]
18 Hb_028486_040 0.0851328757 - - 40S ribosomal protein S14, putative [Ricinus communis]
19 Hb_002097_110 0.0856759216 - - ankyrin repeat-containing protein, putative [Ricinus communis]
20 Hb_001235_210 0.0863366593 - - PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000977_080 Hb_000977_080 Hb_000392_270 Hb_000392_270 Hb_000977_080--Hb_000392_270 Hb_003551_020 Hb_003551_020 Hb_000977_080--Hb_003551_020 Hb_000045_130 Hb_000045_130 Hb_000977_080--Hb_000045_130 Hb_004645_050 Hb_004645_050 Hb_000977_080--Hb_004645_050 Hb_001369_650 Hb_001369_650 Hb_000977_080--Hb_001369_650 Hb_000019_230 Hb_000019_230 Hb_000977_080--Hb_000019_230 Hb_000392_270--Hb_001369_650 Hb_003540_040 Hb_003540_040 Hb_000392_270--Hb_003540_040 Hb_000392_270--Hb_003551_020 Hb_003878_190 Hb_003878_190 Hb_000392_270--Hb_003878_190 Hb_011360_140 Hb_011360_140 Hb_000392_270--Hb_011360_140 Hb_003551_020--Hb_000019_230 Hb_003551_020--Hb_000045_130 Hb_003551_020--Hb_003878_190 Hb_000154_080 Hb_000154_080 Hb_003551_020--Hb_000154_080 Hb_000045_130--Hb_001369_650 Hb_000045_130--Hb_000392_270 Hb_005489_130 Hb_005489_130 Hb_000045_130--Hb_005489_130 Hb_000045_130--Hb_000019_230 Hb_001235_210 Hb_001235_210 Hb_004645_050--Hb_001235_210 Hb_000189_270 Hb_000189_270 Hb_004645_050--Hb_000189_270 Hb_002311_350 Hb_002311_350 Hb_004645_050--Hb_002311_350 Hb_000531_020 Hb_000531_020 Hb_004645_050--Hb_000531_020 Hb_002307_030 Hb_002307_030 Hb_004645_050--Hb_002307_030 Hb_001369_650--Hb_011360_140 Hb_003001_060 Hb_003001_060 Hb_001369_650--Hb_003001_060 Hb_009767_120 Hb_009767_120 Hb_001369_650--Hb_009767_120 Hb_003120_060 Hb_003120_060 Hb_000019_230--Hb_003120_060 Hb_003038_030 Hb_003038_030 Hb_000019_230--Hb_003038_030 Hb_000188_100 Hb_000188_100 Hb_000019_230--Hb_000188_100 Hb_004195_160 Hb_004195_160 Hb_000019_230--Hb_004195_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.0059 4.02112 2.18876 2.14647 12.6299 11.6441
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.7217 16.2877 8.46256 3.38467 1.74372

CAGE analysis