Hb_000977_270

Information

Type -
Description -
Location Contig977: 235937-239674
Sequence    

Annotation

kegg
ID rcu:RCOM_1077240
description 4-nitrophenylphosphatase, putative (EC:3.1.3.41)
nr
ID XP_012085815.1
description PREDICTED: phosphoglycolate phosphatase 1B, chloroplastic [Jatropha curcas]
swissprot
ID P0DKC4
description Phosphoglycolate phosphatase 1B, chloroplastic OS=Arabidopsis thaliana GN=PGLP1B PE=1 SV=1
trembl
ID A0A067K3S8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18073 PE=4 SV=1
Gene Ontology
ID GO:0016791
description phosphoglycolate phosphatase chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64179: 236031-239533
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000977_270 0.0 - - PREDICTED: phosphoglycolate phosphatase 1B, chloroplastic [Jatropha curcas]
2 Hb_007044_250 0.0459997376 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003106_170 0.0855553714 - - Endonuclease III, putative [Ricinus communis]
4 Hb_036790_120 0.1005211293 - - PREDICTED: uncharacterized protein LOC105645122 isoform X1 [Jatropha curcas]
5 Hb_001484_080 0.1022787666 - - 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
6 Hb_002304_180 0.1028643596 - - PREDICTED: magnesium-chelatase subunit ChlI, chloroplastic [Jatropha curcas]
7 Hb_003752_060 0.1055872188 - - PREDICTED: epoxide hydrolase 3 [Jatropha curcas]
8 Hb_003494_030 0.1292858519 - - PREDICTED: protease Do-like 8, chloroplastic [Jatropha curcas]
9 Hb_000667_140 0.1297000654 - - PREDICTED: uridine kinase-like protein 3 isoform X1 [Jatropha curcas]
10 Hb_005563_040 0.132558564 - - PREDICTED: uncharacterized protein LOC105630105 isoform X1 [Jatropha curcas]
11 Hb_000402_170 0.1344112968 - - PREDICTED: glutamate--glyoxylate aminotransferase 2 [Jatropha curcas]
12 Hb_001792_030 0.1355836216 - - PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Jatropha curcas]
13 Hb_007426_170 0.136059307 transcription factor TF Family: TCP -
14 Hb_007694_060 0.1373642849 - - PREDICTED: 50S ribosomal protein L35, chloroplastic [Jatropha curcas]
15 Hb_000110_230 0.1380089467 - - Plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative [Ricinus communis]
16 Hb_114861_010 0.1436389499 - - STRESS ENHANCED protein 1 [Populus trichocarpa]
17 Hb_000012_010 0.1439385315 - - hypothetical protein JCGZ_07709 [Jatropha curcas]
18 Hb_024399_020 0.1475684931 - - electron transporter, putative [Ricinus communis]
19 Hb_000548_060 0.1477221051 - - PREDICTED: fruit protein pKIWI502 [Jatropha curcas]
20 Hb_000189_520 0.1495402806 - - PREDICTED: uncharacterized protein LOC105647658 [Jatropha curcas]

Gene co-expression network

sample Hb_000977_270 Hb_000977_270 Hb_007044_250 Hb_007044_250 Hb_000977_270--Hb_007044_250 Hb_003106_170 Hb_003106_170 Hb_000977_270--Hb_003106_170 Hb_036790_120 Hb_036790_120 Hb_000977_270--Hb_036790_120 Hb_001484_080 Hb_001484_080 Hb_000977_270--Hb_001484_080 Hb_002304_180 Hb_002304_180 Hb_000977_270--Hb_002304_180 Hb_003752_060 Hb_003752_060 Hb_000977_270--Hb_003752_060 Hb_007044_250--Hb_003106_170 Hb_007044_250--Hb_001484_080 Hb_007044_250--Hb_003752_060 Hb_007044_250--Hb_002304_180 Hb_007044_250--Hb_036790_120 Hb_003106_170--Hb_001484_080 Hb_000062_520 Hb_000062_520 Hb_003106_170--Hb_000062_520 Hb_003106_170--Hb_002304_180 Hb_000667_140 Hb_000667_140 Hb_003106_170--Hb_000667_140 Hb_000402_170 Hb_000402_170 Hb_036790_120--Hb_000402_170 Hb_000548_060 Hb_000548_060 Hb_036790_120--Hb_000548_060 Hb_000189_250 Hb_000189_250 Hb_036790_120--Hb_000189_250 Hb_000684_280 Hb_000684_280 Hb_036790_120--Hb_000684_280 Hb_010128_020 Hb_010128_020 Hb_036790_120--Hb_010128_020 Hb_114861_010 Hb_114861_010 Hb_001484_080--Hb_114861_010 Hb_001792_030 Hb_001792_030 Hb_001484_080--Hb_001792_030 Hb_001484_080--Hb_003752_060 Hb_003494_030 Hb_003494_030 Hb_002304_180--Hb_003494_030 Hb_002304_180--Hb_000667_140 Hb_000023_210 Hb_000023_210 Hb_002304_180--Hb_000023_210 Hb_002304_180--Hb_000402_170 Hb_003752_060--Hb_003106_170 Hb_003752_060--Hb_114861_010 Hb_003752_060--Hb_036790_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.71479 3.10081 40.2188 10.3925 5.00436 5.93585
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.2304 12.4874 12.9639 5.95417 100.254

CAGE analysis