Hb_000982_050

Information

Type -
Description -
Location Contig982: 116506-119881
Sequence    

Annotation

kegg
ID pop:POPTR_0014s06470g
description POPTRDRAFT_572103; hypothetical protein
nr
ID XP_012083579.1
description PREDICTED: uncharacterized protein LOC105643124 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K167
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14529 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64412: 116433-119795 , PASA_asmbl_64414: 120356-124490 , PASA_asmbl_64415: 120481-124418
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000982_050 0.0 - - PREDICTED: uncharacterized protein LOC105643124 isoform X1 [Jatropha curcas]
2 Hb_005365_020 0.079965568 - - hypothetical protein JCGZ_15105 [Jatropha curcas]
3 Hb_144166_010 0.0824533291 - - PREDICTED: importin-13 [Jatropha curcas]
4 Hb_000215_220 0.0920124868 - - PREDICTED: derlin-1 isoform X1 [Jatropha curcas]
5 Hb_000085_150 0.0931276871 - - PREDICTED: putative BPI/LBP family protein At1g04970 [Jatropha curcas]
6 Hb_007426_150 0.0959711065 - - PREDICTED: F-box protein At5g46170-like [Jatropha curcas]
7 Hb_001104_160 0.0991174882 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
8 Hb_097218_010 0.0993879217 - - PREDICTED: uncharacterized protein LOC105632664 isoform X1 [Jatropha curcas]
9 Hb_000429_220 0.0993992231 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105640858 isoform X1 [Jatropha curcas]
10 Hb_001195_560 0.1012349895 - - PREDICTED: lysophospholipid acyltransferase LPEAT1 isoform X1 [Jatropha curcas]
11 Hb_000190_120 0.1028657118 - - PREDICTED: uncharacterized protein LOC105649936 [Jatropha curcas]
12 Hb_000139_260 0.1033227832 - - PREDICTED: protein phosphatase 2C 70 [Jatropha curcas]
13 Hb_006445_010 0.1056403535 - - PREDICTED: uncharacterized protein LOC105640147 [Jatropha curcas]
14 Hb_002374_370 0.106152653 - - protein with unknown function [Ricinus communis]
15 Hb_003375_070 0.1095020544 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
16 Hb_021297_050 0.1095945011 - - PREDICTED: signal recognition particle receptor subunit alpha [Jatropha curcas]
17 Hb_154114_010 0.1105990518 - - PREDICTED: SWI/SNF complex subunit SWI3A isoform X2 [Jatropha curcas]
18 Hb_004453_110 0.1109230526 - - Peptidyl-prolyl cis-trans isomerase CYP19-2 isoform 1 [Theobroma cacao]
19 Hb_001619_150 0.1111465941 - - PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 isoform X1 [Jatropha curcas]
20 Hb_000029_300 0.1112179949 - - hypothetical protein JCGZ_10048 [Jatropha curcas]

Gene co-expression network

sample Hb_000982_050 Hb_000982_050 Hb_005365_020 Hb_005365_020 Hb_000982_050--Hb_005365_020 Hb_144166_010 Hb_144166_010 Hb_000982_050--Hb_144166_010 Hb_000215_220 Hb_000215_220 Hb_000982_050--Hb_000215_220 Hb_000085_150 Hb_000085_150 Hb_000982_050--Hb_000085_150 Hb_007426_150 Hb_007426_150 Hb_000982_050--Hb_007426_150 Hb_001104_160 Hb_001104_160 Hb_000982_050--Hb_001104_160 Hb_005365_020--Hb_144166_010 Hb_005365_020--Hb_001104_160 Hb_010068_040 Hb_010068_040 Hb_005365_020--Hb_010068_040 Hb_002154_120 Hb_002154_120 Hb_005365_020--Hb_002154_120 Hb_001821_160 Hb_001821_160 Hb_005365_020--Hb_001821_160 Hb_144166_010--Hb_000085_150 Hb_002078_110 Hb_002078_110 Hb_144166_010--Hb_002078_110 Hb_003124_220 Hb_003124_220 Hb_144166_010--Hb_003124_220 Hb_131646_010 Hb_131646_010 Hb_144166_010--Hb_131646_010 Hb_001109_060 Hb_001109_060 Hb_000215_220--Hb_001109_060 Hb_089140_050 Hb_089140_050 Hb_000215_220--Hb_089140_050 Hb_004631_150 Hb_004631_150 Hb_000215_220--Hb_004631_150 Hb_011344_020 Hb_011344_020 Hb_000215_220--Hb_011344_020 Hb_000139_260 Hb_000139_260 Hb_000215_220--Hb_000139_260 Hb_001195_560 Hb_001195_560 Hb_000085_150--Hb_001195_560 Hb_003371_110 Hb_003371_110 Hb_000085_150--Hb_003371_110 Hb_010222_050 Hb_010222_050 Hb_000085_150--Hb_010222_050 Hb_002823_030 Hb_002823_030 Hb_000085_150--Hb_002823_030 Hb_000866_470 Hb_000866_470 Hb_000085_150--Hb_000866_470 Hb_030131_040 Hb_030131_040 Hb_000085_150--Hb_030131_040 Hb_007426_150--Hb_001195_560 Hb_000933_020 Hb_000933_020 Hb_007426_150--Hb_000933_020 Hb_003018_130 Hb_003018_130 Hb_007426_150--Hb_003018_130 Hb_011618_080 Hb_011618_080 Hb_007426_150--Hb_011618_080 Hb_002273_120 Hb_002273_120 Hb_007426_150--Hb_002273_120 Hb_000429_220 Hb_000429_220 Hb_007426_150--Hb_000429_220 Hb_004195_200 Hb_004195_200 Hb_001104_160--Hb_004195_200 Hb_000289_040 Hb_000289_040 Hb_001104_160--Hb_000289_040 Hb_002835_230 Hb_002835_230 Hb_001104_160--Hb_002835_230 Hb_014361_070 Hb_014361_070 Hb_001104_160--Hb_014361_070 Hb_000402_080 Hb_000402_080 Hb_001104_160--Hb_000402_080 Hb_000696_230 Hb_000696_230 Hb_001104_160--Hb_000696_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.9926 25.5227 18.7065 21.6191 49.14 29.9433
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.5188 18.4494 14.4194 17.0371 22.5154

CAGE analysis