Hb_000983_170

Information

Type -
Description -
Location Contig983: 142514-147679
Sequence    

Annotation

kegg
ID rcu:RCOM_1595250
description Inositol-pentakisphosphate 2-kinase, putative
nr
ID XP_012071906.1
description PREDICTED: inositol-pentakisphosphate 2-kinase-like isoform X1 [Jatropha curcas]
swissprot
ID Q93YN9
description Inositol-pentakisphosphate 2-kinase OS=Arabidopsis thaliana GN=IPK1 PE=1 SV=1
trembl
ID A0A067KU81
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04468 PE=4 SV=1
Gene Ontology
ID GO:0005524
description inositol-pentakisphosphate 2-kinase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64484: 142346-147688 , PASA_asmbl_64485: 147799-147913
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000983_170 0.0 - - PREDICTED: inositol-pentakisphosphate 2-kinase-like isoform X1 [Jatropha curcas]
2 Hb_000243_160 0.0710186409 - - glutaredoxin-1, grx1, putative [Ricinus communis]
3 Hb_003038_120 0.0962698659 - - rer1 protein, putative [Ricinus communis]
4 Hb_002837_060 0.0980513963 - - PREDICTED: uncharacterized protein At1g10890-like [Nelumbo nucifera]
5 Hb_001396_280 0.1028828413 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 2 [Jatropha curcas]
6 Hb_000034_080 0.106810063 - - PREDICTED: MADS-box protein AGL24-like isoform X1 [Jatropha curcas]
7 Hb_001077_030 0.1071232984 - - PREDICTED: somatic embryogenesis receptor kinase 1 isoform X2 [Jatropha curcas]
8 Hb_001418_040 0.1082242796 - - PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Jatropha curcas]
9 Hb_000031_280 0.113096745 - - -
10 Hb_005000_320 0.1133387376 - - PREDICTED: casein kinase I isoform delta-like [Jatropha curcas]
11 Hb_010053_040 0.114790773 - - PREDICTED: ras-related protein Rab11D [Jatropha curcas]
12 Hb_000261_230 0.1155049997 - - PREDICTED: UBX domain-containing protein 4 [Vitis vinifera]
13 Hb_032990_010 0.1170098477 - - PREDICTED: fanconi-associated nuclease 1 homolog [Jatropha curcas]
14 Hb_033834_030 0.1173658173 - - PREDICTED: nucleolar complex protein 2 homolog isoform X1 [Jatropha curcas]
15 Hb_000979_170 0.1175261857 - - clathrin assembly protein, putative [Ricinus communis]
16 Hb_006816_050 0.1176819325 - - PREDICTED: RNA polymerase II-associated protein 3 isoform X4 [Jatropha curcas]
17 Hb_003897_040 0.1181232309 - - translocon-associated protein, beta subunit precursor, putative [Ricinus communis]
18 Hb_001143_180 0.1184478618 - - PREDICTED: replication factor C subunit 5 [Jatropha curcas]
19 Hb_004631_180 0.1190772484 - - PREDICTED: LMBR1 domain-containing protein 2 homolog A [Jatropha curcas]
20 Hb_002965_040 0.1192870166 - - drought-responsive family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_000983_170 Hb_000983_170 Hb_000243_160 Hb_000243_160 Hb_000983_170--Hb_000243_160 Hb_003038_120 Hb_003038_120 Hb_000983_170--Hb_003038_120 Hb_002837_060 Hb_002837_060 Hb_000983_170--Hb_002837_060 Hb_001396_280 Hb_001396_280 Hb_000983_170--Hb_001396_280 Hb_000034_080 Hb_000034_080 Hb_000983_170--Hb_000034_080 Hb_001077_030 Hb_001077_030 Hb_000983_170--Hb_001077_030 Hb_001418_040 Hb_001418_040 Hb_000243_160--Hb_001418_040 Hb_000031_280 Hb_000031_280 Hb_000243_160--Hb_000031_280 Hb_000243_160--Hb_000034_080 Hb_003688_090 Hb_003688_090 Hb_000243_160--Hb_003688_090 Hb_000243_160--Hb_003038_120 Hb_000776_100 Hb_000776_100 Hb_003038_120--Hb_000776_100 Hb_003897_040 Hb_003897_040 Hb_003038_120--Hb_003897_040 Hb_032990_010 Hb_032990_010 Hb_003038_120--Hb_032990_010 Hb_003096_060 Hb_003096_060 Hb_003038_120--Hb_003096_060 Hb_005460_050 Hb_005460_050 Hb_003038_120--Hb_005460_050 Hb_006588_070 Hb_006588_070 Hb_003038_120--Hb_006588_070 Hb_002837_060--Hb_032990_010 Hb_000101_380 Hb_000101_380 Hb_002837_060--Hb_000101_380 Hb_005503_040 Hb_005503_040 Hb_002837_060--Hb_005503_040 Hb_002837_060--Hb_001396_280 Hb_000879_160 Hb_000879_160 Hb_002837_060--Hb_000879_160 Hb_029866_100 Hb_029866_100 Hb_001396_280--Hb_029866_100 Hb_028308_010 Hb_028308_010 Hb_001396_280--Hb_028308_010 Hb_029904_020 Hb_029904_020 Hb_001396_280--Hb_029904_020 Hb_001396_280--Hb_000031_280 Hb_000392_370 Hb_000392_370 Hb_001396_280--Hb_000392_370 Hb_009049_020 Hb_009049_020 Hb_001396_280--Hb_009049_020 Hb_000034_080--Hb_003038_120 Hb_000034_080--Hb_003897_040 Hb_000034_080--Hb_032990_010 Hb_000034_080--Hb_003096_060 Hb_007062_040 Hb_007062_040 Hb_000034_080--Hb_007062_040 Hb_007413_040 Hb_007413_040 Hb_000034_080--Hb_007413_040 Hb_000718_070 Hb_000718_070 Hb_001077_030--Hb_000718_070 Hb_002311_070 Hb_002311_070 Hb_001077_030--Hb_002311_070 Hb_001077_030--Hb_003096_060 Hb_003680_230 Hb_003680_230 Hb_001077_030--Hb_003680_230 Hb_001135_120 Hb_001135_120 Hb_001077_030--Hb_001135_120 Hb_000922_020 Hb_000922_020 Hb_001077_030--Hb_000922_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.28277 6.30254 7.31516 8.96376 8.766 7.18834
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.12796 3.78368 1.22302 3.84045 3.40348

CAGE analysis