Hb_000983_180

Information

Type -
Description -
Location Contig983: 150752-169440
Sequence    

Annotation

kegg
ID rcu:RCOM_1595230
description cytochrome P450, putative (EC:1.14.13.79)
nr
ID XP_002510423.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID O81077
description Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP707A2 PE=2 SV=1
trembl
ID B9R7Y0
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1595230 PE=3 SV=1
Gene Ontology
ID GO:0004497
description abscisic acid 8 -hydroxylase 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000983_180 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000770_020 0.0601766104 - - hypothetical protein POPTR_0001s39195g [Populus trichocarpa]
3 Hb_011045_020 0.0602452163 - - hypothetical protein CICLE_v100140161mg, partial [Citrus clementina]
4 Hb_010374_010 0.0602531766 - - TMV resistance protein N, putative [Ricinus communis]
5 Hb_005839_070 0.0602904702 - - hypothetical protein POPTR_0013s08160g [Populus trichocarpa]
6 Hb_000302_050 0.0603359567 - - -
7 Hb_126916_010 0.0603943669 - - PREDICTED: putative receptor-like protein kinase At3g47110, partial [Jatropha curcas]
8 Hb_003453_070 0.0607733086 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
9 Hb_006856_060 0.0607897748 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
10 Hb_005096_020 0.0628236699 - - PREDICTED: DIS3-like exonuclease 2-like isoform X1 [Citrus sinensis]
11 Hb_001975_060 0.0635040152 - - hypothetical protein JCGZ_11079 [Jatropha curcas]
12 Hb_000172_020 0.0636994554 - - PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Vitis vinifera]
13 Hb_103659_010 0.0662511763 - - conserved hypothetical protein [Ricinus communis]
14 Hb_004077_010 0.0666193787 - - retinoblastoma-binding protein, putative [Ricinus communis]
15 Hb_135513_010 0.0677195432 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_061641_010 0.0678047751 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
17 Hb_000953_160 0.0685184624 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Ricinus communis]
18 Hb_003910_030 0.0687128384 - - PREDICTED: probable disease resistance protein At5g66910 [Populus euphratica]
19 Hb_110587_010 0.0694038026 - - unnamed protein product [Coffea canephora]
20 Hb_169511_020 0.0709074063 - - PREDICTED: uncharacterized protein LOC105037523, partial [Elaeis guineensis]

Gene co-expression network

sample Hb_000983_180 Hb_000983_180 Hb_000770_020 Hb_000770_020 Hb_000983_180--Hb_000770_020 Hb_011045_020 Hb_011045_020 Hb_000983_180--Hb_011045_020 Hb_010374_010 Hb_010374_010 Hb_000983_180--Hb_010374_010 Hb_005839_070 Hb_005839_070 Hb_000983_180--Hb_005839_070 Hb_000302_050 Hb_000302_050 Hb_000983_180--Hb_000302_050 Hb_126916_010 Hb_126916_010 Hb_000983_180--Hb_126916_010 Hb_000770_020--Hb_011045_020 Hb_000770_020--Hb_000302_050 Hb_000770_020--Hb_126916_010 Hb_006856_060 Hb_006856_060 Hb_000770_020--Hb_006856_060 Hb_000770_020--Hb_010374_010 Hb_000770_020--Hb_005839_070 Hb_011045_020--Hb_000302_050 Hb_011045_020--Hb_126916_010 Hb_011045_020--Hb_006856_060 Hb_011045_020--Hb_010374_010 Hb_011045_020--Hb_005839_070 Hb_010374_010--Hb_005839_070 Hb_003453_070 Hb_003453_070 Hb_010374_010--Hb_003453_070 Hb_010374_010--Hb_000302_050 Hb_010374_010--Hb_126916_010 Hb_005839_070--Hb_003453_070 Hb_005839_070--Hb_000302_050 Hb_005839_070--Hb_126916_010 Hb_000302_050--Hb_126916_010 Hb_000302_050--Hb_006856_060 Hb_126916_010--Hb_006856_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.03019 0.0103931 3.46696 0 0.0140302
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0299791 0

CAGE analysis