Hb_000984_080

Information

Type -
Description -
Location Contig984: 109432-112912
Sequence    

Annotation

kegg
ID rcu:RCOM_1584490
description Receptor protein kinase CLAVATA1 precursor, putative (EC:2.7.10.1 1.3.1.74)
nr
ID XP_012068112.1
description PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
swissprot
ID Q9LJM4
description Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1
trembl
ID A0A067KZD3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15949 PE=3 SV=1
Gene Ontology
ID GO:0005622
description receptor-like protein kinase haiku2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64535: 109488-112924
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000984_080 0.0 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
2 Hb_076895_020 0.0750627727 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X2 [Jatropha curcas]
3 Hb_000140_260 0.0873258248 - - PREDICTED: uncharacterized protein LOC105642920 [Jatropha curcas]
4 Hb_000539_080 0.0883410492 - - hypothetical protein POPTR_0039s00260g, partial [Populus trichocarpa]
5 Hb_002110_270 0.0915729497 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
6 Hb_000758_030 0.0978558915 transcription factor TF Family: ERF Ethylene-responsive transcription factor, putative [Ricinus communis]
7 Hb_006006_070 0.0980680366 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_008225_080 0.0981404097 - - PREDICTED: cytochrome P450 71A26-like [Jatropha curcas]
9 Hb_032050_050 0.0983411837 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
10 Hb_000205_210 0.0987499942 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like isoform X1 [Citrus sinensis]
11 Hb_027141_010 0.0988843206 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
12 Hb_004200_040 0.10105393 - - laccase, putative [Ricinus communis]
13 Hb_000976_020 0.1017675014 - - leucoanthocyanidin dioxygenase, putative [Ricinus communis]
14 Hb_000081_020 0.1061648949 - - PREDICTED: protein NRT1/ PTR FAMILY 1.1-like [Camelina sativa]
15 Hb_002900_070 0.1086591411 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001405_100 0.1139231635 - - PREDICTED: lysM domain receptor-like kinase 4 [Jatropha curcas]
17 Hb_004881_060 0.1165319021 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]
18 Hb_020332_040 0.1176635019 - - PREDICTED: alcohol dehydrogenase 1-like [Jatropha curcas]
19 Hb_005064_040 0.1208575558 - - hypothetical protein POPTR_0008s02680g [Populus trichocarpa]
20 Hb_001838_050 0.1226121741 - - hypothetical protein B456_007G218500 [Gossypium raimondii]

Gene co-expression network

sample Hb_000984_080 Hb_000984_080 Hb_076895_020 Hb_076895_020 Hb_000984_080--Hb_076895_020 Hb_000140_260 Hb_000140_260 Hb_000984_080--Hb_000140_260 Hb_000539_080 Hb_000539_080 Hb_000984_080--Hb_000539_080 Hb_002110_270 Hb_002110_270 Hb_000984_080--Hb_002110_270 Hb_000758_030 Hb_000758_030 Hb_000984_080--Hb_000758_030 Hb_006006_070 Hb_006006_070 Hb_000984_080--Hb_006006_070 Hb_076895_020--Hb_000539_080 Hb_076895_020--Hb_002110_270 Hb_076895_020--Hb_006006_070 Hb_027141_010 Hb_027141_010 Hb_076895_020--Hb_027141_010 Hb_076895_020--Hb_000758_030 Hb_004200_040 Hb_004200_040 Hb_000140_260--Hb_004200_040 Hb_000205_210 Hb_000205_210 Hb_000140_260--Hb_000205_210 Hb_000140_260--Hb_027141_010 Hb_000140_260--Hb_076895_020 Hb_000140_260--Hb_000539_080 Hb_000081_020 Hb_000081_020 Hb_000539_080--Hb_000081_020 Hb_000948_070 Hb_000948_070 Hb_000539_080--Hb_000948_070 Hb_000539_080--Hb_002110_270 Hb_000539_080--Hb_006006_070 Hb_000539_080--Hb_027141_010 Hb_002110_270--Hb_006006_070 Hb_002110_270--Hb_000758_030 Hb_002900_070 Hb_002900_070 Hb_002110_270--Hb_002900_070 Hb_008225_080 Hb_008225_080 Hb_000758_030--Hb_008225_080 Hb_000758_030--Hb_006006_070 Hb_000976_020 Hb_000976_020 Hb_000758_030--Hb_000976_020 Hb_000758_030--Hb_000539_080 Hb_002232_400 Hb_002232_400 Hb_006006_070--Hb_002232_400 Hb_000441_170 Hb_000441_170 Hb_006006_070--Hb_000441_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.204177 34.1113 5.92226 20.816 0.0868752 0.163571
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.306323 0.863798 0.673755 156.467 7.47318

CAGE analysis