Hb_000984_100

Information

Type -
Description -
Location Contig984: 132010-135297
Sequence    

Annotation

kegg
ID rcu:RCOM_1584500
description receptor protein kinase, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_002510008.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID O22476
description Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1
trembl
ID B9R6R5
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_1584500 PE=3 SV=1
Gene Ontology
ID GO:0005622
description receptor-like protein kinase hsl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000984_100 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_001879_050 0.1040798262 - - Disease resistance protein RFL1, putative [Ricinus communis]
3 Hb_000544_020 0.1286701755 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
4 Hb_001608_030 0.1439115976 - - Protein NSP-INTERACTING KINASE 1 [Glycine soja]
5 Hb_002571_010 0.1460827581 - - cationic amino acid transporter, putative [Ricinus communis]
6 Hb_003371_260 0.1502716233 - - hypothetical protein EUGRSUZ_B03661 [Eucalyptus grandis]
7 Hb_004466_070 0.1593959351 - - hypothetical protein RCOM_1447500 [Ricinus communis]
8 Hb_006738_060 0.159691847 - - ATP binding protein, putative [Ricinus communis]
9 Hb_002686_400 0.1603798423 - - hypothetical protein POPTR_0019s04500g [Populus trichocarpa]
10 Hb_158696_010 0.1604903119 - - PREDICTED: putative disease resistance protein RGA4, partial [Jatropha curcas]
11 Hb_062479_010 0.1614031484 - - hypothetical protein PHAVU_008G071200g [Phaseolus vulgaris]
12 Hb_000172_010 0.1642167511 - - PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1 [Populus euphratica]
13 Hb_002609_150 0.1660433744 transcription factor TF Family: C2H2 conserved hypothetical protein [Ricinus communis]
14 Hb_000532_130 0.1661959951 - - hypothetical protein [Anabaena sp. PCC 7108]
15 Hb_001504_270 0.1695502748 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
16 Hb_001408_150 0.1725126332 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
17 Hb_000808_160 0.1742290995 - - PREDICTED: uncharacterized protein LOC105647443 [Jatropha curcas]
18 Hb_036568_010 0.1746647181 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 23 [Jatropha curcas]
19 Hb_169620_010 0.17522142 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
20 Hb_060909_010 0.1756925388 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]

Gene co-expression network

sample Hb_000984_100 Hb_000984_100 Hb_001879_050 Hb_001879_050 Hb_000984_100--Hb_001879_050 Hb_000544_020 Hb_000544_020 Hb_000984_100--Hb_000544_020 Hb_001608_030 Hb_001608_030 Hb_000984_100--Hb_001608_030 Hb_002571_010 Hb_002571_010 Hb_000984_100--Hb_002571_010 Hb_003371_260 Hb_003371_260 Hb_000984_100--Hb_003371_260 Hb_004466_070 Hb_004466_070 Hb_000984_100--Hb_004466_070 Hb_000172_010 Hb_000172_010 Hb_001879_050--Hb_000172_010 Hb_002609_150 Hb_002609_150 Hb_001879_050--Hb_002609_150 Hb_001879_050--Hb_002571_010 Hb_001148_040 Hb_001148_040 Hb_001879_050--Hb_001148_040 Hb_000579_220 Hb_000579_220 Hb_001879_050--Hb_000579_220 Hb_060909_010 Hb_060909_010 Hb_000544_020--Hb_060909_010 Hb_158696_010 Hb_158696_010 Hb_000544_020--Hb_158696_010 Hb_004648_100 Hb_004648_100 Hb_000544_020--Hb_004648_100 Hb_001248_110 Hb_001248_110 Hb_000544_020--Hb_001248_110 Hb_000532_130 Hb_000532_130 Hb_000544_020--Hb_000532_130 Hb_007137_030 Hb_007137_030 Hb_001608_030--Hb_007137_030 Hb_093177_010 Hb_093177_010 Hb_001608_030--Hb_093177_010 Hb_001608_030--Hb_158696_010 Hb_010080_020 Hb_010080_020 Hb_001608_030--Hb_010080_020 Hb_000007_160 Hb_000007_160 Hb_001608_030--Hb_000007_160 Hb_000808_160 Hb_000808_160 Hb_002571_010--Hb_000808_160 Hb_009247_030 Hb_009247_030 Hb_002571_010--Hb_009247_030 Hb_000172_080 Hb_000172_080 Hb_002571_010--Hb_000172_080 Hb_001754_200 Hb_001754_200 Hb_002571_010--Hb_001754_200 Hb_004166_010 Hb_004166_010 Hb_002571_010--Hb_004166_010 Hb_003371_210 Hb_003371_210 Hb_003371_260--Hb_003371_210 Hb_066320_010 Hb_066320_010 Hb_003371_260--Hb_066320_010 Hb_000431_030 Hb_000431_030 Hb_003371_260--Hb_000431_030 Hb_002239_030 Hb_002239_030 Hb_003371_260--Hb_002239_030 Hb_010381_110 Hb_010381_110 Hb_003371_260--Hb_010381_110 Hb_014361_130 Hb_014361_130 Hb_003371_260--Hb_014361_130 Hb_001863_450 Hb_001863_450 Hb_004466_070--Hb_001863_450 Hb_004466_070--Hb_158696_010 Hb_004466_070--Hb_001248_110 Hb_004466_070--Hb_004166_010 Hb_033642_070 Hb_033642_070 Hb_004466_070--Hb_033642_070 Hb_003371_140 Hb_003371_140 Hb_004466_070--Hb_003371_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.617246 15.1543 0.596916 4.76036 0.665038 0.742719
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0461165 0.314511 0.254299 3.66675 2.47515

CAGE analysis