Hb_000984_140

Information

Type -
Description -
Location Contig984: 196631-201715
Sequence    

Annotation

kegg
ID rcu:RCOM_1584630
description xylulose kinase, putative (EC:2.7.1.17)
nr
ID XP_012068116.1
description PREDICTED: xylulose kinase [Jatropha curcas]
swissprot
ID Q3SYZ6
description Xylulose kinase OS=Bos taurus GN=XYLB PE=2 SV=1
trembl
ID A0A067LBR4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15956 PE=4 SV=1
Gene Ontology
ID GO:0005829
description xylulose kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64551: 197759-201623 , PASA_asmbl_64552: 196750-198192 , PASA_asmbl_64553: 197759-201615
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000984_140 0.0 - - PREDICTED: xylulose kinase [Jatropha curcas]
2 Hb_021977_010 0.0787245519 - - PREDICTED: leukotriene A-4 hydrolase homolog [Jatropha curcas]
3 Hb_005772_030 0.0792495911 - - PREDICTED: protein trichome birefringence-like 35 [Jatropha curcas]
4 Hb_001140_180 0.0941047868 - - PREDICTED: transmembrane ascorbate ferrireductase 1 [Jatropha curcas]
5 Hb_005854_040 0.0950093894 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004204_210 0.0958228577 - - PREDICTED: heparanase-like protein 1 [Jatropha curcas]
7 Hb_001414_010 0.0979410062 transcription factor TF Family: ARR-B two-component sensor histidine kinase bacteria, putative [Ricinus communis]
8 Hb_003490_060 0.1001139098 - - PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X2 [Sesamum indicum]
9 Hb_010407_030 0.1006544521 - - PREDICTED: casein kinase I-like [Jatropha curcas]
10 Hb_001998_220 0.1008210336 - - PREDICTED: isoamylase 1, chloroplastic [Jatropha curcas]
11 Hb_002828_060 0.1017269549 - - PREDICTED: probable phytol kinase 3, chloroplastic [Jatropha curcas]
12 Hb_000997_070 0.1020898673 - - PREDICTED: ureidoglycolate hydrolase isoform X1 [Jatropha curcas]
13 Hb_024570_040 0.1042063046 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
14 Hb_009078_020 0.1043462299 - - PREDICTED: CDPK-related kinase 7-like [Populus euphratica]
15 Hb_002809_160 0.1081993804 - - PREDICTED: protein FAM63A [Jatropha curcas]
16 Hb_029552_020 0.1083530262 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002687_200 0.1106834267 - - conserved hypothetical protein [Ricinus communis]
18 Hb_010381_020 0.1107051701 - - Endosomal P24A protein precursor, putative [Ricinus communis]
19 Hb_000418_020 0.1109982997 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
20 Hb_003490_050 0.1110933863 - - PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000984_140 Hb_000984_140 Hb_021977_010 Hb_021977_010 Hb_000984_140--Hb_021977_010 Hb_005772_030 Hb_005772_030 Hb_000984_140--Hb_005772_030 Hb_001140_180 Hb_001140_180 Hb_000984_140--Hb_001140_180 Hb_005854_040 Hb_005854_040 Hb_000984_140--Hb_005854_040 Hb_004204_210 Hb_004204_210 Hb_000984_140--Hb_004204_210 Hb_001414_010 Hb_001414_010 Hb_000984_140--Hb_001414_010 Hb_021977_010--Hb_001414_010 Hb_003661_010 Hb_003661_010 Hb_021977_010--Hb_003661_010 Hb_000599_360 Hb_000599_360 Hb_021977_010--Hb_000599_360 Hb_009476_120 Hb_009476_120 Hb_021977_010--Hb_009476_120 Hb_001998_220 Hb_001998_220 Hb_021977_010--Hb_001998_220 Hb_158845_060 Hb_158845_060 Hb_021977_010--Hb_158845_060 Hb_002809_160 Hb_002809_160 Hb_005772_030--Hb_002809_160 Hb_005772_030--Hb_004204_210 Hb_012353_040 Hb_012353_040 Hb_005772_030--Hb_012353_040 Hb_002025_270 Hb_002025_270 Hb_005772_030--Hb_002025_270 Hb_009078_020 Hb_009078_020 Hb_005772_030--Hb_009078_020 Hb_029552_020 Hb_029552_020 Hb_001140_180--Hb_029552_020 Hb_002828_060 Hb_002828_060 Hb_001140_180--Hb_002828_060 Hb_001279_020 Hb_001279_020 Hb_001140_180--Hb_001279_020 Hb_000562_070 Hb_000562_070 Hb_001140_180--Hb_000562_070 Hb_001053_080 Hb_001053_080 Hb_001140_180--Hb_001053_080 Hb_001411_130 Hb_001411_130 Hb_001140_180--Hb_001411_130 Hb_000027_200 Hb_000027_200 Hb_005854_040--Hb_000027_200 Hb_007317_020 Hb_007317_020 Hb_005854_040--Hb_007317_020 Hb_002687_200 Hb_002687_200 Hb_005854_040--Hb_002687_200 Hb_005854_040--Hb_021977_010 Hb_001226_130 Hb_001226_130 Hb_005854_040--Hb_001226_130 Hb_015884_020 Hb_015884_020 Hb_005854_040--Hb_015884_020 Hb_003470_070 Hb_003470_070 Hb_004204_210--Hb_003470_070 Hb_004746_010 Hb_004746_010 Hb_004204_210--Hb_004746_010 Hb_004204_210--Hb_001140_180 Hb_005701_090 Hb_005701_090 Hb_004204_210--Hb_005701_090 Hb_001414_010--Hb_003661_010 Hb_001414_010--Hb_009476_120 Hb_008165_020 Hb_008165_020 Hb_001414_010--Hb_008165_020 Hb_000300_030 Hb_000300_030 Hb_001414_010--Hb_000300_030 Hb_160608_010 Hb_160608_010 Hb_001414_010--Hb_160608_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.90036 10.442 14.8158 17.9318 7.88811 5.06294
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.76424 2.01693 2.10069 14.085 18.5746

CAGE analysis