Hb_000984_180

Information

Type -
Description -
Location Contig984: 231785-233588
Sequence    

Annotation

kegg
ID pop:POPTR_0002s11300g
description POPTRDRAFT_754856; hypothetical protein
nr
ID XP_012068120.1
description PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO3 isoform X1 [Jatropha curcas]
swissprot
ID O82289
description Probable inactive poly [ADP-ribose] polymerase SRO1 OS=Arabidopsis thaliana GN=SRO1 PE=1 SV=2
trembl
ID A0A067L2T6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15960 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64569: 231834-233699
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000984_180 0.0 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO3 isoform X1 [Jatropha curcas]
2 Hb_000599_120 0.0776420356 - - PREDICTED: putative E3 ubiquitin-protein ligase XBAT34 [Jatropha curcas]
3 Hb_000078_130 0.0858831435 - - -
4 Hb_000057_060 0.0874751598 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
5 Hb_001416_040 0.0894511863 - - acid phosphatase, putative [Ricinus communis]
6 Hb_001433_170 0.0914853506 - - PREDICTED: topless-related protein 3 isoform X1 [Jatropha curcas]
7 Hb_005288_120 0.0931650145 - - PREDICTED: uncharacterized protein LOC105647751 [Jatropha curcas]
8 Hb_012055_020 0.0951498901 - - PREDICTED: metal transporter Nramp3 [Jatropha curcas]
9 Hb_002014_080 0.0964585189 - - PREDICTED: tankyrase-1 isoform X4 [Jatropha curcas]
10 Hb_000327_240 0.0978376483 - - PREDICTED: interaptin-like [Jatropha curcas]
11 Hb_127979_010 0.0985428676 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]
12 Hb_003404_030 0.099334319 - - PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like isoform X1 [Jatropha curcas]
13 Hb_019613_020 0.0998226129 - - phospholipase C, putative [Ricinus communis]
14 Hb_035524_030 0.1005099932 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000161_030 0.1016039718 transcription factor TF Family: TCP PREDICTED: transcription factor TCP8 [Jatropha curcas]
16 Hb_000005_050 0.1017484073 - - PREDICTED: uncharacterized protein LOC105627993 [Jatropha curcas]
17 Hb_000696_110 0.1026753763 - - PREDICTED: la-related protein 1C-like isoform X1 [Jatropha curcas]
18 Hb_007447_010 0.1030913527 - - PREDICTED: CBS domain-containing protein CBSCBSPB3 isoform X3 [Jatropha curcas]
19 Hb_001001_160 0.1048809387 - - Phosphatidic acid phosphohydrolase 2 isoform 1 [Theobroma cacao]
20 Hb_010261_020 0.1053990266 - - hypothetical protein JCGZ_17258 [Jatropha curcas]

Gene co-expression network

sample Hb_000984_180 Hb_000984_180 Hb_000599_120 Hb_000599_120 Hb_000984_180--Hb_000599_120 Hb_000078_130 Hb_000078_130 Hb_000984_180--Hb_000078_130 Hb_000057_060 Hb_000057_060 Hb_000984_180--Hb_000057_060 Hb_001416_040 Hb_001416_040 Hb_000984_180--Hb_001416_040 Hb_001433_170 Hb_001433_170 Hb_000984_180--Hb_001433_170 Hb_005288_120 Hb_005288_120 Hb_000984_180--Hb_005288_120 Hb_002391_110 Hb_002391_110 Hb_000599_120--Hb_002391_110 Hb_000599_120--Hb_000057_060 Hb_000365_360 Hb_000365_360 Hb_000599_120--Hb_000365_360 Hb_000696_110 Hb_000696_110 Hb_000599_120--Hb_000696_110 Hb_127979_010 Hb_127979_010 Hb_000599_120--Hb_127979_010 Hb_003581_140 Hb_003581_140 Hb_000078_130--Hb_003581_140 Hb_001454_060 Hb_001454_060 Hb_000078_130--Hb_001454_060 Hb_002014_080 Hb_002014_080 Hb_000078_130--Hb_002014_080 Hb_000490_030 Hb_000490_030 Hb_000078_130--Hb_000490_030 Hb_000230_330 Hb_000230_330 Hb_000078_130--Hb_000230_330 Hb_006091_030 Hb_006091_030 Hb_000078_130--Hb_006091_030 Hb_000057_060--Hb_001433_170 Hb_009510_030 Hb_009510_030 Hb_000057_060--Hb_009510_030 Hb_003404_030 Hb_003404_030 Hb_000057_060--Hb_003404_030 Hb_000771_140 Hb_000771_140 Hb_000057_060--Hb_000771_140 Hb_000057_060--Hb_127979_010 Hb_002506_010 Hb_002506_010 Hb_000057_060--Hb_002506_010 Hb_006816_290 Hb_006816_290 Hb_001416_040--Hb_006816_290 Hb_000327_240 Hb_000327_240 Hb_001416_040--Hb_000327_240 Hb_002400_270 Hb_002400_270 Hb_001416_040--Hb_002400_270 Hb_000491_080 Hb_000491_080 Hb_001416_040--Hb_000491_080 Hb_001416_040--Hb_001433_170 Hb_001433_170--Hb_127979_010 Hb_000179_250 Hb_000179_250 Hb_001433_170--Hb_000179_250 Hb_000176_140 Hb_000176_140 Hb_001433_170--Hb_000176_140 Hb_026048_090 Hb_026048_090 Hb_001433_170--Hb_026048_090 Hb_011609_190 Hb_011609_190 Hb_001433_170--Hb_011609_190 Hb_035524_030 Hb_035524_030 Hb_005288_120--Hb_035524_030 Hb_010261_020 Hb_010261_020 Hb_005288_120--Hb_010261_020 Hb_000017_340 Hb_000017_340 Hb_005288_120--Hb_000017_340 Hb_005288_120--Hb_002014_080 Hb_000085_280 Hb_000085_280 Hb_005288_120--Hb_000085_280 Hb_000671_100 Hb_000671_100 Hb_005288_120--Hb_000671_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
186.756 42.1828 12.0224 25.3941 265.31 254.742
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
176.295 77.6411 176.002 50.3331 40.9087

CAGE analysis