Hb_000984_210

Information

Type -
Description -
Location Contig984: 255431-259143
Sequence    

Annotation

kegg
ID egr:104451821
description uncharacterized LOC104451821
nr
ID XP_010064705.1
description PREDICTED: uncharacterized protein LOC104451821 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0005622
description inositol-tetrakisphosphate 1-kinase 2-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000984_210 0.0 - - PREDICTED: uncharacterized protein LOC104451821 [Eucalyptus grandis]
2 Hb_005228_040 0.1100889678 - - PREDICTED: uncharacterized protein At4g06598-like [Jatropha curcas]
3 Hb_002305_010 0.1389523592 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
4 Hb_003226_250 0.145162028 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
5 Hb_003728_090 0.1484256039 - - hypothetical protein JCGZ_12701 [Jatropha curcas]
6 Hb_183963_010 0.1484583257 - - core region of GTP cyclohydrolase I family protein [Populus trichocarpa]
7 Hb_011310_040 0.1594844085 transcription factor TF Family: bZIP transcription factor hy5, putative [Ricinus communis]
8 Hb_007576_060 0.1608041964 - - -
9 Hb_001628_120 0.1608076757 - - putative ascorbate peroxidase, partial [Taraxacum brevicorniculatum]
10 Hb_000189_440 0.1608308881 - - hypothetical protein JCGZ_23470 [Jatropha curcas]
11 Hb_000805_010 0.1627663502 - - PREDICTED: uncharacterized protein LOC105629931 [Jatropha curcas]
12 Hb_000140_060 0.1644846975 - - 50S ribosomal protein L5, putative [Ricinus communis]
13 Hb_009252_010 0.168787038 - - PREDICTED: kinesin light chain [Jatropha curcas]
14 Hb_003935_070 0.1700817587 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
15 Hb_001916_150 0.1707456461 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-3 [Vitis vinifera]
16 Hb_003778_020 0.1745506009 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
17 Hb_011053_030 0.1769187986 - - -
18 Hb_000107_590 0.1772035 - - PREDICTED: tricalbin-3 [Jatropha curcas]
19 Hb_000445_120 0.1772953937 - - ATP binding protein, putative [Ricinus communis]
20 Hb_000749_020 0.1778385041 - - Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobroma cacao]

Gene co-expression network

sample Hb_000984_210 Hb_000984_210 Hb_005228_040 Hb_005228_040 Hb_000984_210--Hb_005228_040 Hb_002305_010 Hb_002305_010 Hb_000984_210--Hb_002305_010 Hb_003226_250 Hb_003226_250 Hb_000984_210--Hb_003226_250 Hb_003728_090 Hb_003728_090 Hb_000984_210--Hb_003728_090 Hb_183963_010 Hb_183963_010 Hb_000984_210--Hb_183963_010 Hb_011310_040 Hb_011310_040 Hb_000984_210--Hb_011310_040 Hb_009252_010 Hb_009252_010 Hb_005228_040--Hb_009252_010 Hb_001628_120 Hb_001628_120 Hb_005228_040--Hb_001628_120 Hb_005228_040--Hb_183963_010 Hb_005228_040--Hb_003226_250 Hb_000834_080 Hb_000834_080 Hb_005228_040--Hb_000834_080 Hb_000107_590 Hb_000107_590 Hb_002305_010--Hb_000107_590 Hb_000951_120 Hb_000951_120 Hb_002305_010--Hb_000951_120 Hb_000805_010 Hb_000805_010 Hb_002305_010--Hb_000805_010 Hb_000210_080 Hb_000210_080 Hb_002305_010--Hb_000210_080 Hb_002374_450 Hb_002374_450 Hb_002305_010--Hb_002374_450 Hb_001369_010 Hb_001369_010 Hb_003226_250--Hb_001369_010 Hb_000808_150 Hb_000808_150 Hb_003226_250--Hb_000808_150 Hb_003226_250--Hb_011310_040 Hb_002759_220 Hb_002759_220 Hb_003226_250--Hb_002759_220 Hb_002596_080 Hb_002596_080 Hb_003226_250--Hb_002596_080 Hb_003462_040 Hb_003462_040 Hb_003226_250--Hb_003462_040 Hb_003025_140 Hb_003025_140 Hb_003728_090--Hb_003025_140 Hb_163145_030 Hb_163145_030 Hb_003728_090--Hb_163145_030 Hb_003728_090--Hb_005228_040 Hb_003728_090--Hb_183963_010 Hb_130589_010 Hb_130589_010 Hb_003728_090--Hb_130589_010 Hb_011053_020 Hb_011053_020 Hb_183963_010--Hb_011053_020 Hb_000866_050 Hb_000866_050 Hb_183963_010--Hb_000866_050 Hb_026314_030 Hb_026314_030 Hb_183963_010--Hb_026314_030 Hb_011053_030 Hb_011053_030 Hb_183963_010--Hb_011053_030 Hb_000023_210 Hb_000023_210 Hb_183963_010--Hb_000023_210 Hb_011310_040--Hb_002596_080 Hb_000139_300 Hb_000139_300 Hb_011310_040--Hb_000139_300 Hb_002157_270 Hb_002157_270 Hb_011310_040--Hb_002157_270 Hb_002164_020 Hb_002164_020 Hb_011310_040--Hb_002164_020 Hb_004306_110 Hb_004306_110 Hb_011310_040--Hb_004306_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0951703 1.16806 3.6866 7.26574 0.186384 1.72155
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.13162 1.0668 2.22836 1.00463 9.76991

CAGE analysis