Hb_000984_220

Information

Type -
Description -
Location Contig984: 259794-263714
Sequence    

Annotation

kegg
ID pop:POPTR_0005s19370g
description POPTRDRAFT_209085; hypothetical protein
nr
ID XP_011014078.1
description PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Populus euphratica]
swissprot
ID Q9SUG3
description Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidopsis thaliana GN=ITPK3 PE=1 SV=2
trembl
ID A0A067LBS0
description Inositol-tetrakisphosphate 1-kinase OS=Jatropha curcas GN=JCGZ_15961 PE=3 SV=1
Gene Ontology
ID GO:0005634
description inositol-tetrakisphosphate 1-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64573: 259930-260501 , PASA_asmbl_64575: 262450-262748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000984_220 0.0 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Populus euphratica]
2 Hb_005511_130 0.0936524879 - - PREDICTED: transmembrane protein 115-like [Populus euphratica]
3 Hb_004730_020 0.1009333026 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
4 Hb_000800_020 0.1101250246 - - PREDICTED: 3-phosphoinositide-dependent protein kinase 2 [Jatropha curcas]
5 Hb_001160_110 0.1157004055 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
6 Hb_003687_080 0.1181690874 - - PREDICTED: casein kinase I-like [Jatropha curcas]
7 Hb_004158_050 0.1235587898 - - hypothetical protein JCGZ_09026 [Jatropha curcas]
8 Hb_000032_410 0.1247553404 - - PREDICTED: dynamin-related protein 5A [Jatropha curcas]
9 Hb_001123_110 0.1269582324 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005496_020 0.127465535 - - PREDICTED: uncharacterized protein LOC105630867 [Jatropha curcas]
11 Hb_029253_010 0.1277783761 - - PREDICTED: KH domain-containing protein SPIN1-like [Jatropha curcas]
12 Hb_074399_010 0.1303631939 - - PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]
13 Hb_001579_300 0.130415337 - - PREDICTED: probable polygalacturonase At1g80170 [Jatropha curcas]
14 Hb_002900_150 0.1319947362 - - PREDICTED: syntaxin-81 [Jatropha curcas]
15 Hb_007044_090 0.1335725828 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
16 Hb_011381_040 0.1348837677 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic [Jatropha curcas]
17 Hb_002498_240 0.1350117944 - - PREDICTED: glucan endo-1,3-beta-glucosidase 1 isoform X1 [Jatropha curcas]
18 Hb_000526_010 0.1390778278 - - PREDICTED: uroporphyrinogen-III C-methyltransferase [Jatropha curcas]
19 Hb_119583_020 0.1400556555 - - PREDICTED: uncharacterized protein LOC105628090 [Jatropha curcas]
20 Hb_002026_090 0.1401025618 - - PREDICTED: ubiquitin-conjugating enzyme E2 4-like [Jatropha curcas]

Gene co-expression network

sample Hb_000984_220 Hb_000984_220 Hb_005511_130 Hb_005511_130 Hb_000984_220--Hb_005511_130 Hb_004730_020 Hb_004730_020 Hb_000984_220--Hb_004730_020 Hb_000800_020 Hb_000800_020 Hb_000984_220--Hb_000800_020 Hb_001160_110 Hb_001160_110 Hb_000984_220--Hb_001160_110 Hb_003687_080 Hb_003687_080 Hb_000984_220--Hb_003687_080 Hb_004158_050 Hb_004158_050 Hb_000984_220--Hb_004158_050 Hb_005511_130--Hb_004730_020 Hb_005511_130--Hb_003687_080 Hb_000032_410 Hb_000032_410 Hb_005511_130--Hb_000032_410 Hb_000915_130 Hb_000915_130 Hb_005511_130--Hb_000915_130 Hb_005357_110 Hb_005357_110 Hb_005511_130--Hb_005357_110 Hb_001579_300 Hb_001579_300 Hb_004730_020--Hb_001579_300 Hb_004730_020--Hb_000032_410 Hb_004730_020--Hb_005357_110 Hb_000527_080 Hb_000527_080 Hb_004730_020--Hb_000527_080 Hb_003740_020 Hb_003740_020 Hb_004730_020--Hb_003740_020 Hb_006588_190 Hb_006588_190 Hb_000800_020--Hb_006588_190 Hb_013405_070 Hb_013405_070 Hb_000800_020--Hb_013405_070 Hb_011671_340 Hb_011671_340 Hb_000800_020--Hb_011671_340 Hb_000800_020--Hb_005511_130 Hb_011381_040 Hb_011381_040 Hb_000800_020--Hb_011381_040 Hb_001160_110--Hb_003687_080 Hb_003160_070 Hb_003160_070 Hb_001160_110--Hb_003160_070 Hb_001663_130 Hb_001663_130 Hb_001160_110--Hb_001663_130 Hb_002026_090 Hb_002026_090 Hb_001160_110--Hb_002026_090 Hb_001160_110--Hb_000032_410 Hb_001160_110--Hb_004158_050 Hb_000327_330 Hb_000327_330 Hb_003687_080--Hb_000327_330 Hb_074399_010 Hb_074399_010 Hb_003687_080--Hb_074399_010 Hb_000001_090 Hb_000001_090 Hb_003687_080--Hb_000001_090 Hb_000318_220 Hb_000318_220 Hb_003687_080--Hb_000318_220 Hb_004158_050--Hb_002026_090 Hb_004158_050--Hb_000327_330 Hb_001623_490 Hb_001623_490 Hb_004158_050--Hb_001623_490 Hb_004158_050--Hb_003687_080 Hb_007594_080 Hb_007594_080 Hb_004158_050--Hb_007594_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.91068 2.40998 11.1478 7.87921 1.28447 2.58886
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.24626 1.4915 1.25042 1.32135 3.90744

CAGE analysis