Hb_000985_050

Information

Type -
Description -
Location Contig985: 74511-89594
Sequence    

Annotation

kegg
ID rcu:RCOM_1213190
description hypothetical protein
nr
ID XP_012089606.1
description PREDICTED: uncharacterized protein LOC105647985 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JGE7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01723 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64621: 74948-78221 , PASA_asmbl_64622: 75737-78221 , PASA_asmbl_64623: 78222-86265 , PASA_asmbl_64624: 86460-87212 , PASA_asmbl_64625: 88017-89248 , PASA_asmbl_64626: 88404-89389
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000985_050 0.0 - - PREDICTED: uncharacterized protein LOC105647985 isoform X1 [Jatropha curcas]
2 Hb_001702_050 0.0878934663 - - PREDICTED: probable protein S-acyltransferase 19 isoform X1 [Jatropha curcas]
3 Hb_011457_140 0.0988823356 - - PREDICTED: uncharacterized protein LOC105649947 [Jatropha curcas]
4 Hb_001558_040 0.1007504503 - - PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
5 Hb_000109_260 0.1010387286 - - PREDICTED: WAT1-related protein At3g28050-like isoform X1 [Jatropha curcas]
6 Hb_080147_050 0.1036542261 - - PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]
7 Hb_000976_110 0.1056859762 - - PREDICTED: KRR1 small subunit processome component homolog [Jatropha curcas]
8 Hb_143629_020 0.1059111402 - - PREDICTED: uncharacterized protein LOC105647351 [Jatropha curcas]
9 Hb_000172_360 0.1061001413 - - PREDICTED: apoptotic chromatin condensation inducer in the nucleus [Jatropha curcas]
10 Hb_000027_200 0.1061261932 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
11 Hb_000220_120 0.1062957905 - - PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Jatropha curcas]
12 Hb_001414_010 0.1068355395 transcription factor TF Family: ARR-B two-component sensor histidine kinase bacteria, putative [Ricinus communis]
13 Hb_103688_010 0.1075488174 - - PREDICTED: sucrose-phosphatase 2-like [Jatropha curcas]
14 Hb_009476_120 0.1092877803 - - Clathrin heavy chain 1 [Glycine soja]
15 Hb_000318_150 0.1096461242 - - RNA-binding protein Nova-1, putative [Ricinus communis]
16 Hb_000960_080 0.1096531574 - - PREDICTED: topless-related protein 1-like isoform X2 [Jatropha curcas]
17 Hb_003680_020 0.1104655805 - - UDP-glucosyltransferase, putative [Ricinus communis]
18 Hb_008165_020 0.1113641515 - - PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X1 [Jatropha curcas]
19 Hb_011925_020 0.1114959196 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
20 Hb_000035_010 0.111991242 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR12-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000985_050 Hb_000985_050 Hb_001702_050 Hb_001702_050 Hb_000985_050--Hb_001702_050 Hb_011457_140 Hb_011457_140 Hb_000985_050--Hb_011457_140 Hb_001558_040 Hb_001558_040 Hb_000985_050--Hb_001558_040 Hb_000109_260 Hb_000109_260 Hb_000985_050--Hb_000109_260 Hb_080147_050 Hb_080147_050 Hb_000985_050--Hb_080147_050 Hb_000976_110 Hb_000976_110 Hb_000985_050--Hb_000976_110 Hb_001998_220 Hb_001998_220 Hb_001702_050--Hb_001998_220 Hb_029879_120 Hb_029879_120 Hb_001702_050--Hb_029879_120 Hb_005000_090 Hb_005000_090 Hb_001702_050--Hb_005000_090 Hb_021977_010 Hb_021977_010 Hb_001702_050--Hb_021977_010 Hb_003125_180 Hb_003125_180 Hb_001702_050--Hb_003125_180 Hb_000358_220 Hb_000358_220 Hb_011457_140--Hb_000358_220 Hb_008642_060 Hb_008642_060 Hb_011457_140--Hb_008642_060 Hb_000300_030 Hb_000300_030 Hb_011457_140--Hb_000300_030 Hb_000008_280 Hb_000008_280 Hb_011457_140--Hb_000008_280 Hb_010315_020 Hb_010315_020 Hb_011457_140--Hb_010315_020 Hb_000173_160 Hb_000173_160 Hb_011457_140--Hb_000173_160 Hb_001307_240 Hb_001307_240 Hb_001558_040--Hb_001307_240 Hb_002007_260 Hb_002007_260 Hb_001558_040--Hb_002007_260 Hb_000579_130 Hb_000579_130 Hb_001558_040--Hb_000579_130 Hb_001085_080 Hb_001085_080 Hb_001558_040--Hb_001085_080 Hb_000020_160 Hb_000020_160 Hb_001558_040--Hb_000020_160 Hb_158845_060 Hb_158845_060 Hb_001558_040--Hb_158845_060 Hb_000109_260--Hb_000976_110 Hb_003490_060 Hb_003490_060 Hb_000109_260--Hb_003490_060 Hb_003680_020 Hb_003680_020 Hb_000109_260--Hb_003680_020 Hb_011674_040 Hb_011674_040 Hb_000109_260--Hb_011674_040 Hb_000009_030 Hb_000009_030 Hb_000109_260--Hb_000009_030 Hb_003490_050 Hb_003490_050 Hb_000109_260--Hb_003490_050 Hb_020805_180 Hb_020805_180 Hb_080147_050--Hb_020805_180 Hb_000321_090 Hb_000321_090 Hb_080147_050--Hb_000321_090 Hb_000834_230 Hb_000834_230 Hb_080147_050--Hb_000834_230 Hb_000787_200 Hb_000787_200 Hb_080147_050--Hb_000787_200 Hb_080147_050--Hb_158845_060 Hb_007245_020 Hb_007245_020 Hb_080147_050--Hb_007245_020 Hb_000976_110--Hb_011674_040 Hb_000976_110--Hb_000009_030 Hb_000976_110--Hb_003490_060 Hb_000318_150 Hb_000318_150 Hb_000976_110--Hb_000318_150 Hb_000976_110--Hb_000787_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.94355 4.0202 3.65581 3.90612 1.07831 2.69245
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.829695 1.16309 0.733297 4.67557 4.88106

CAGE analysis