Hb_000985_140

Information

Type -
Description -
Location Contig985: 187333-195981
Sequence    

Annotation

kegg
ID rcu:RCOM_1213020
description metal ion binding protein, putative
nr
ID XP_012083885.1
description PREDICTED: uncharacterized protein LOC105643381 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9M0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15016 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000985_140 0.0 - - PREDICTED: uncharacterized protein LOC105643381 isoform X3 [Jatropha curcas]
2 Hb_004393_030 0.0823760768 - - CBL-interacting protein kinase 6 [Populus trichocarpa]
3 Hb_003078_070 0.0831718863 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g25290 [Jatropha curcas]
4 Hb_021254_020 0.0881225115 - - calmodulin binding protein, putative [Ricinus communis]
5 Hb_001247_160 0.0950675211 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
6 Hb_000032_090 0.0988578365 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000071_090 0.1015310992 - - PREDICTED: probable protein phosphatase 2C 4 [Jatropha curcas]
8 Hb_000836_420 0.1032079512 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_001623_410 0.1075173538 - - PREDICTED: beta-amylase 1, chloroplastic [Jatropha curcas]
10 Hb_004109_240 0.1096682173 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
11 Hb_007007_030 0.1100402514 - - conserved hypothetical protein [Ricinus communis]
12 Hb_008810_030 0.1101374045 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
13 Hb_001660_130 0.1146396433 - - PREDICTED: serine/threonine-protein kinase-like protein CCR4 [Jatropha curcas]
14 Hb_000454_080 0.1159104701 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
15 Hb_000152_410 0.1173106028 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
16 Hb_001254_020 0.117439809 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
17 Hb_073171_050 0.1176087019 transcription factor TF Family: MYB-related PREDICTED: myb-like protein H [Jatropha curcas]
18 Hb_005867_030 0.1183130723 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
19 Hb_000054_140 0.1215206363 - - PREDICTED: MACPF domain-containing protein CAD1 [Jatropha curcas]
20 Hb_002374_030 0.1216393012 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000985_140 Hb_000985_140 Hb_004393_030 Hb_004393_030 Hb_000985_140--Hb_004393_030 Hb_003078_070 Hb_003078_070 Hb_000985_140--Hb_003078_070 Hb_021254_020 Hb_021254_020 Hb_000985_140--Hb_021254_020 Hb_001247_160 Hb_001247_160 Hb_000985_140--Hb_001247_160 Hb_000032_090 Hb_000032_090 Hb_000985_140--Hb_000032_090 Hb_000071_090 Hb_000071_090 Hb_000985_140--Hb_000071_090 Hb_008810_030 Hb_008810_030 Hb_004393_030--Hb_008810_030 Hb_004393_030--Hb_021254_020 Hb_004393_030--Hb_000032_090 Hb_001660_130 Hb_001660_130 Hb_004393_030--Hb_001660_130 Hb_007007_030 Hb_007007_030 Hb_004393_030--Hb_007007_030 Hb_003078_070--Hb_021254_020 Hb_000172_410 Hb_000172_410 Hb_003078_070--Hb_000172_410 Hb_004837_200 Hb_004837_200 Hb_003078_070--Hb_004837_200 Hb_003078_070--Hb_000071_090 Hb_000836_420 Hb_000836_420 Hb_003078_070--Hb_000836_420 Hb_004109_240 Hb_004109_240 Hb_021254_020--Hb_004109_240 Hb_021254_020--Hb_008810_030 Hb_021254_020--Hb_001660_130 Hb_003633_150 Hb_003633_150 Hb_001247_160--Hb_003633_150 Hb_001247_160--Hb_021254_020 Hb_001019_020 Hb_001019_020 Hb_001247_160--Hb_001019_020 Hb_002936_030 Hb_002936_030 Hb_001247_160--Hb_002936_030 Hb_001247_160--Hb_003078_070 Hb_001254_020 Hb_001254_020 Hb_000032_090--Hb_001254_020 Hb_002374_030 Hb_002374_030 Hb_000032_090--Hb_002374_030 Hb_000032_090--Hb_008810_030 Hb_012799_040 Hb_012799_040 Hb_000032_090--Hb_012799_040 Hb_008406_070 Hb_008406_070 Hb_000071_090--Hb_008406_070 Hb_000071_090--Hb_002374_030 Hb_001769_120 Hb_001769_120 Hb_000071_090--Hb_001769_120 Hb_189208_060 Hb_189208_060 Hb_000071_090--Hb_189208_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0957887 70.3434 60.6463 33.587 0.323456 0.872334
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.12088 0.804933 0.353476 10.3969 20.0399

CAGE analysis