Hb_000991_060

Information

Type -
Description -
Location Contig991: 80108-81021
Sequence    

Annotation

kegg
ID rcu:RCOM_0451750
description Zeamatin precursor, putative
nr
ID XP_012074976.1
description PREDICTED: thaumatin-like protein [Jatropha curcas]
swissprot
ID Q53MB8
description Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1
trembl
ID B9SZY6
description Zeamatin, putative OS=Ricinus communis GN=RCOM_0451750 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64774: 81560-81714
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000991_060 0.0 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
2 Hb_006252_070 0.070716868 - - hypothetical protein JCGZ_17254 [Jatropha curcas]
3 Hb_027411_030 0.0834304767 - - metal ion binding protein, putative [Ricinus communis]
4 Hb_000291_240 0.0862070663 - - hypothetical protein POPTR_0005s16430g [Populus trichocarpa]
5 Hb_001296_010 0.0951287568 - - conserved hypothetical protein [Ricinus communis]
6 Hb_013399_060 0.0964493428 - - PREDICTED: uncharacterized protein LOC105133408 [Populus euphratica]
7 Hb_004757_010 0.0974476954 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
8 Hb_000244_290 0.1005699341 - - PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Jatropha curcas]
9 Hb_010863_020 0.1032371012 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
10 Hb_011344_050 0.1067109937 - - PREDICTED: 21 kDa protein [Jatropha curcas]
11 Hb_001454_350 0.1078527458 - - PREDICTED: uncharacterized protein LOC105643449 [Jatropha curcas]
12 Hb_001141_430 0.1080082668 - - hypothetical protein POPTR_0008s15160g [Populus trichocarpa]
13 Hb_000243_240 0.1092713245 - - cytochrome P450 family protein [Populus trichocarpa]
14 Hb_001579_160 0.1121353828 - - PREDICTED: kininogen-1-like [Jatropha curcas]
15 Hb_000645_080 0.1141842383 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
16 Hb_001157_120 0.1142010029 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
17 Hb_000188_040 0.1155843132 - - PREDICTED: uncharacterized protein LOC105629522 [Jatropha curcas]
18 Hb_006618_100 0.1161720978 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
19 Hb_009421_060 0.1177602797 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
20 Hb_001712_010 0.1183749907 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000991_060 Hb_000991_060 Hb_006252_070 Hb_006252_070 Hb_000991_060--Hb_006252_070 Hb_027411_030 Hb_027411_030 Hb_000991_060--Hb_027411_030 Hb_000291_240 Hb_000291_240 Hb_000991_060--Hb_000291_240 Hb_001296_010 Hb_001296_010 Hb_000991_060--Hb_001296_010 Hb_013399_060 Hb_013399_060 Hb_000991_060--Hb_013399_060 Hb_004757_010 Hb_004757_010 Hb_000991_060--Hb_004757_010 Hb_000188_040 Hb_000188_040 Hb_006252_070--Hb_000188_040 Hb_000020_140 Hb_000020_140 Hb_006252_070--Hb_000020_140 Hb_001454_350 Hb_001454_350 Hb_006252_070--Hb_001454_350 Hb_002014_130 Hb_002014_130 Hb_006252_070--Hb_002014_130 Hb_006252_070--Hb_000291_240 Hb_027411_030--Hb_004757_010 Hb_011344_050 Hb_011344_050 Hb_027411_030--Hb_011344_050 Hb_001579_160 Hb_001579_160 Hb_027411_030--Hb_001579_160 Hb_001141_430 Hb_001141_430 Hb_027411_030--Hb_001141_430 Hb_145975_010 Hb_145975_010 Hb_027411_030--Hb_145975_010 Hb_025557_080 Hb_025557_080 Hb_000291_240--Hb_025557_080 Hb_000291_240--Hb_001454_350 Hb_000243_240 Hb_000243_240 Hb_000291_240--Hb_000243_240 Hb_000291_240--Hb_145975_010 Hb_000291_240--Hb_001141_430 Hb_010863_020 Hb_010863_020 Hb_001296_010--Hb_010863_020 Hb_001296_010--Hb_013399_060 Hb_001296_010--Hb_011344_050 Hb_002030_190 Hb_002030_190 Hb_001296_010--Hb_002030_190 Hb_001296_010--Hb_027411_030 Hb_013399_060--Hb_010863_020 Hb_003858_070 Hb_003858_070 Hb_013399_060--Hb_003858_070 Hb_001006_300 Hb_001006_300 Hb_013399_060--Hb_001006_300 Hb_003598_050 Hb_003598_050 Hb_013399_060--Hb_003598_050 Hb_180088_010 Hb_180088_010 Hb_013399_060--Hb_180088_010 Hb_159791_010 Hb_159791_010 Hb_004757_010--Hb_159791_010 Hb_001343_060 Hb_001343_060 Hb_004757_010--Hb_001343_060 Hb_004757_010--Hb_001141_430 Hb_004757_010--Hb_011344_050 Hb_001712_010 Hb_001712_010 Hb_004757_010--Hb_001712_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.157308 1.7297 1.16643 29.1601 0.170064 0.185572
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.002 4.25647

CAGE analysis