Hb_000991_080

Information

Type -
Description -
Location Contig991: 102875-104947
Sequence    

Annotation

kegg
ID rcu:RCOM_0233840
description kinase, putative (EC:2.7.11.22)
nr
ID XP_002532997.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9M2S4
description L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana GN=LECRKS4 PE=2 SV=1
trembl
ID B9T428
description Kinase, putative OS=Ricinus communis GN=RCOM_0233840 PE=3 SV=1
Gene Ontology
ID GO:0004693
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64776: 102810-105071
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000991_080 0.0 - - kinase, putative [Ricinus communis]
2 Hb_001013_080 0.0726596696 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
3 Hb_000384_020 0.0783051707 - - sucrose phosphate syntase, putative [Ricinus communis]
4 Hb_173107_020 0.0792135069 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
5 Hb_003435_040 0.083811085 - - tonoplast intrinsic protein [Hevea brasiliensis]
6 Hb_000162_070 0.085352426 - - phospholipase C, putative [Ricinus communis]
7 Hb_114733_010 0.0871137613 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
8 Hb_008725_020 0.0904774735 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
9 Hb_000816_150 0.0916076484 - - oligopeptide transporter, putative [Ricinus communis]
10 Hb_000537_090 0.0997675237 - - conserved hypothetical protein [Ricinus communis]
11 Hb_153180_010 0.1034500301 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
12 Hb_000732_100 0.1068298689 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
13 Hb_008598_010 0.1084841074 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
14 Hb_003849_200 0.110034617 - - PREDICTED: BTB/POZ domain-containing protein At1g67900-like isoform X1 [Citrus sinensis]
15 Hb_010174_200 0.1112376354 - - PREDICTED: uncharacterized protein LOC105644743 isoform X1 [Jatropha curcas]
16 Hb_000045_080 0.113765704 - - amino acid transporter, putative [Ricinus communis]
17 Hb_004634_030 0.1139326103 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001913_030 0.1140879687 - - ankyrin repeat protein [Bruguiera gymnorhiza]
19 Hb_000468_050 0.1147390743 - - -
20 Hb_002598_020 0.1170617866 - - PREDICTED: sugar transporter ERD6-like 5 [Populus euphratica]

Gene co-expression network

sample Hb_000991_080 Hb_000991_080 Hb_001013_080 Hb_001013_080 Hb_000991_080--Hb_001013_080 Hb_000384_020 Hb_000384_020 Hb_000991_080--Hb_000384_020 Hb_173107_020 Hb_173107_020 Hb_000991_080--Hb_173107_020 Hb_003435_040 Hb_003435_040 Hb_000991_080--Hb_003435_040 Hb_000162_070 Hb_000162_070 Hb_000991_080--Hb_000162_070 Hb_114733_010 Hb_114733_010 Hb_000991_080--Hb_114733_010 Hb_001913_030 Hb_001913_030 Hb_001013_080--Hb_001913_030 Hb_001013_080--Hb_003435_040 Hb_003849_200 Hb_003849_200 Hb_001013_080--Hb_003849_200 Hb_001013_080--Hb_000162_070 Hb_008725_020 Hb_008725_020 Hb_001013_080--Hb_008725_020 Hb_000384_020--Hb_173107_020 Hb_000816_150 Hb_000816_150 Hb_000384_020--Hb_000816_150 Hb_000384_020--Hb_114733_010 Hb_000384_020--Hb_000162_070 Hb_000045_080 Hb_000045_080 Hb_000384_020--Hb_000045_080 Hb_173107_020--Hb_114733_010 Hb_002250_140 Hb_002250_140 Hb_173107_020--Hb_002250_140 Hb_009771_040 Hb_009771_040 Hb_173107_020--Hb_009771_040 Hb_173107_020--Hb_000045_080 Hb_006736_040 Hb_006736_040 Hb_003435_040--Hb_006736_040 Hb_024650_010 Hb_024650_010 Hb_003435_040--Hb_024650_010 Hb_003435_040--Hb_003849_200 Hb_001518_030 Hb_001518_030 Hb_003435_040--Hb_001518_030 Hb_026144_040 Hb_026144_040 Hb_000162_070--Hb_026144_040 Hb_008598_010 Hb_008598_010 Hb_000162_070--Hb_008598_010 Hb_007237_080 Hb_007237_080 Hb_000162_070--Hb_007237_080 Hb_000162_070--Hb_000045_080 Hb_002811_110 Hb_002811_110 Hb_000162_070--Hb_002811_110 Hb_114733_010--Hb_000816_150 Hb_017700_030 Hb_017700_030 Hb_114733_010--Hb_017700_030 Hb_000732_100 Hb_000732_100 Hb_114733_010--Hb_000732_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0736904 9.64824 5.06829 16.9335 0 0.062425
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.45711 4.91032

CAGE analysis