Hb_000993_020

Information

Type -
Description -
Location Contig993: 33089-35405
Sequence    

Annotation

kegg
ID rcu:RCOM_0803140
description monooxygenase, putative (EC:1.14.13.8)
nr
ID XP_012077457.1
description PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
swissprot
ID Q8VZ59
description Indole-3-pyruvate monooxygenase YUCCA6 OS=Arabidopsis thaliana GN=YUC6 PE=1 SV=1
trembl
ID A0A067KPN3
description Flavin-containing monooxygenase OS=Jatropha curcas GN=JCGZ_07791 PE=3 SV=1
Gene Ontology
ID GO:0004499
description indole-3-pyruvate monooxygenase yucca6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000993_020 0.0 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
2 Hb_003768_110 0.0633241338 - - hypothetical protein POPTR_0004s12230g [Populus trichocarpa]
3 Hb_014865_010 0.1284196584 - - hypothetical protein PRUPE_ppa017366mg, partial [Prunus persica]
4 Hb_001623_400 0.1294043272 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002437_010 0.1300156652 - - PREDICTED: uncharacterized protein LOC105123193 [Populus euphratica]
6 Hb_000979_080 0.1318799098 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
7 Hb_000417_350 0.1382607428 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001242_020 0.1475283181 - - hypothetical protein JCGZ_08334 [Jatropha curcas]
9 Hb_129637_010 0.151678864 - - PREDICTED: alpha-mannosidase isoform X1 [Populus euphratica]
10 Hb_000676_130 0.1525044206 - - PREDICTED: peroxidase 72-like [Nelumbo nucifera]
11 Hb_006834_010 0.1526661678 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003064_010 0.1536577698 - - Senescence-related gene 1 [Theobroma cacao]
13 Hb_002217_210 0.1538043795 - - -
14 Hb_003266_060 0.1569134904 - - PREDICTED: basic 7S globulin-like [Populus euphratica]
15 Hb_000306_050 0.1593672615 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
16 Hb_004452_080 0.1598285658 - - ring finger protein, putative [Ricinus communis]
17 Hb_001416_170 0.1615521747 - - kinase, putative [Ricinus communis]
18 Hb_001002_090 0.1630060236 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
19 Hb_001633_120 0.1662024375 - - PREDICTED: uncharacterized protein LOC105630199 [Jatropha curcas]
20 Hb_000300_170 0.1664609705 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]

Gene co-expression network

sample Hb_000993_020 Hb_000993_020 Hb_003768_110 Hb_003768_110 Hb_000993_020--Hb_003768_110 Hb_014865_010 Hb_014865_010 Hb_000993_020--Hb_014865_010 Hb_001623_400 Hb_001623_400 Hb_000993_020--Hb_001623_400 Hb_002437_010 Hb_002437_010 Hb_000993_020--Hb_002437_010 Hb_000979_080 Hb_000979_080 Hb_000993_020--Hb_000979_080 Hb_000417_350 Hb_000417_350 Hb_000993_020--Hb_000417_350 Hb_002217_210 Hb_002217_210 Hb_003768_110--Hb_002217_210 Hb_001922_020 Hb_001922_020 Hb_003768_110--Hb_001922_020 Hb_001002_090 Hb_001002_090 Hb_003768_110--Hb_001002_090 Hb_003768_110--Hb_000979_080 Hb_001416_170 Hb_001416_170 Hb_003768_110--Hb_001416_170 Hb_001242_020 Hb_001242_020 Hb_014865_010--Hb_001242_020 Hb_000676_130 Hb_000676_130 Hb_014865_010--Hb_000676_130 Hb_014865_010--Hb_002437_010 Hb_009780_110 Hb_009780_110 Hb_014865_010--Hb_009780_110 Hb_001596_030 Hb_001596_030 Hb_014865_010--Hb_001596_030 Hb_002042_200 Hb_002042_200 Hb_001623_400--Hb_002042_200 Hb_003064_010 Hb_003064_010 Hb_001623_400--Hb_003064_010 Hb_000347_230 Hb_000347_230 Hb_001623_400--Hb_000347_230 Hb_004021_100 Hb_004021_100 Hb_001623_400--Hb_004021_100 Hb_003734_120 Hb_003734_120 Hb_001623_400--Hb_003734_120 Hb_017491_040 Hb_017491_040 Hb_001623_400--Hb_017491_040 Hb_002437_010--Hb_001242_020 Hb_001633_120 Hb_001633_120 Hb_002437_010--Hb_001633_120 Hb_002437_010--Hb_000676_130 Hb_002437_010--Hb_000979_080 Hb_000187_110 Hb_000187_110 Hb_000979_080--Hb_000187_110 Hb_000979_080--Hb_001002_090 Hb_003768_100 Hb_003768_100 Hb_000979_080--Hb_003768_100 Hb_003226_050 Hb_003226_050 Hb_000979_080--Hb_003226_050 Hb_055440_010 Hb_055440_010 Hb_000979_080--Hb_055440_010 Hb_001053_110 Hb_001053_110 Hb_000979_080--Hb_001053_110 Hb_009711_040 Hb_009711_040 Hb_000417_350--Hb_009711_040 Hb_129637_010 Hb_129637_010 Hb_000417_350--Hb_129637_010 Hb_000417_350--Hb_001053_110 Hb_005333_120 Hb_005333_120 Hb_000417_350--Hb_005333_120 Hb_000306_050 Hb_000306_050 Hb_000417_350--Hb_000306_050 Hb_003171_070 Hb_003171_070 Hb_000417_350--Hb_003171_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0697889 0.0920206 0.197813 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.290086 0

CAGE analysis