Hb_000997_070

Information

Type -
Description -
Location Contig997: 78712-83814
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa005238mg
description hypothetical protein
nr
ID XP_012069781.1
description PREDICTED: ureidoglycolate hydrolase isoform X1 [Jatropha curcas]
swissprot
ID Q8VXY9
description Ureidoglycolate hydrolase OS=Arabidopsis thaliana GN=UAH PE=1 SV=1
trembl
ID A0A067KVR9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02284 PE=4 SV=1
Gene Ontology
ID GO:0016813
description ureidoglycolate hydrolase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64847: 78740-83816
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000997_070 0.0 - - PREDICTED: ureidoglycolate hydrolase isoform X1 [Jatropha curcas]
2 Hb_000562_100 0.086368624 - - PREDICTED: protein IQ-DOMAIN 32 [Jatropha curcas]
3 Hb_000167_040 0.0873486142 - - PREDICTED: serine carboxypeptidase-like [Jatropha curcas]
4 Hb_001195_310 0.0900096531 - - ATP binding protein, putative [Ricinus communis]
5 Hb_010381_020 0.0963168574 - - Endosomal P24A protein precursor, putative [Ricinus communis]
6 Hb_001969_140 0.0986181755 - - PREDICTED: uncharacterized protein LOC105634929 [Jatropha curcas]
7 Hb_000418_020 0.1016836932 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
8 Hb_000984_140 0.1020898673 - - PREDICTED: xylulose kinase [Jatropha curcas]
9 Hb_003849_120 0.1071266863 - - PREDICTED: uncharacterized protein LOC100264440 [Vitis vinifera]
10 Hb_183086_030 0.1092467134 - - GTPase-activating protein GYP7 [Gossypium arboreum]
11 Hb_005062_110 0.1105798117 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
12 Hb_021977_010 0.1112976215 - - PREDICTED: leukotriene A-4 hydrolase homolog [Jatropha curcas]
13 Hb_000012_400 0.1117495358 - - PREDICTED: K(+) efflux antiporter 6 [Jatropha curcas]
14 Hb_000959_300 0.1129032921 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming] isoform X2 [Jatropha curcas]
15 Hb_002217_080 0.114051566 - - PREDICTED: probable beta-1,3-galactosyltransferase 16 [Jatropha curcas]
16 Hb_033642_060 0.1142059012 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
17 Hb_010407_030 0.1143022778 - - PREDICTED: casein kinase I-like [Jatropha curcas]
18 Hb_001411_130 0.1147004602 - - PREDICTED: uncharacterized protein LOC105631354 isoform X1 [Jatropha curcas]
19 Hb_002072_010 0.116345666 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002942_230 0.1179882004 - - PREDICTED: long chain base biosynthesis protein 2a [Populus euphratica]

Gene co-expression network

sample Hb_000997_070 Hb_000997_070 Hb_000562_100 Hb_000562_100 Hb_000997_070--Hb_000562_100 Hb_000167_040 Hb_000167_040 Hb_000997_070--Hb_000167_040 Hb_001195_310 Hb_001195_310 Hb_000997_070--Hb_001195_310 Hb_010381_020 Hb_010381_020 Hb_000997_070--Hb_010381_020 Hb_001969_140 Hb_001969_140 Hb_000997_070--Hb_001969_140 Hb_000418_020 Hb_000418_020 Hb_000997_070--Hb_000418_020 Hb_012353_040 Hb_012353_040 Hb_000562_100--Hb_012353_040 Hb_003849_120 Hb_003849_120 Hb_000562_100--Hb_003849_120 Hb_000012_400 Hb_000012_400 Hb_000562_100--Hb_000012_400 Hb_004052_180 Hb_004052_180 Hb_000562_100--Hb_004052_180 Hb_000866_070 Hb_000866_070 Hb_000562_100--Hb_000866_070 Hb_011310_050 Hb_011310_050 Hb_000167_040--Hb_011310_050 Hb_000167_040--Hb_001195_310 Hb_000167_040--Hb_001969_140 Hb_000679_040 Hb_000679_040 Hb_000167_040--Hb_000679_040 Hb_000167_040--Hb_010381_020 Hb_001195_310--Hb_001969_140 Hb_001195_310--Hb_000679_040 Hb_020586_010 Hb_020586_010 Hb_001195_310--Hb_020586_010 Hb_001195_310--Hb_011310_050 Hb_102763_010 Hb_102763_010 Hb_010381_020--Hb_102763_010 Hb_010407_030 Hb_010407_030 Hb_010381_020--Hb_010407_030 Hb_005000_090 Hb_005000_090 Hb_010381_020--Hb_005000_090 Hb_002311_130 Hb_002311_130 Hb_010381_020--Hb_002311_130 Hb_001216_110 Hb_001216_110 Hb_001969_140--Hb_001216_110 Hb_001969_140--Hb_000679_040 Hb_001969_140--Hb_011310_050 Hb_000959_300 Hb_000959_300 Hb_001969_140--Hb_000959_300 Hb_000256_230 Hb_000256_230 Hb_000418_020--Hb_000256_230 Hb_000665_170 Hb_000665_170 Hb_000418_020--Hb_000665_170 Hb_002687_200 Hb_002687_200 Hb_000418_020--Hb_002687_200 Hb_021576_070 Hb_021576_070 Hb_000418_020--Hb_021576_070 Hb_002739_120 Hb_002739_120 Hb_000418_020--Hb_002739_120 Hb_003777_030 Hb_003777_030 Hb_000418_020--Hb_003777_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.41422 23.2355 26.7524 55.1003 17.9674 13.3228
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.67313 2.74532 6.42443 22.0069 36.3308

CAGE analysis