Hb_000997_320

Information

Type -
Description -
Location Contig997: 291007-293727
Sequence    

Annotation

kegg
ID mdm:103416876
description acylamino-acid-releasing enzyme-like
nr
ID XP_008353311.1
description PREDICTED: acylamino-acid-releasing enzyme-like [Malus domestica]
swissprot
ID P13676
description Acylamino-acid-releasing enzyme OS=Rattus norvegicus GN=Apeh PE=1 SV=1
trembl
ID A0A0A8YQW5
description Uncharacterized protein OS=Arundo donax PE=4 SV=1
Gene Ontology
ID GO:0004252
description acylamino-acid-releasing enzyme isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64888: 292477-293844
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000997_320 0.0 - - PREDICTED: acylamino-acid-releasing enzyme-like [Malus domestica]
2 Hb_036388_010 0.1003923384 - - PREDICTED: formate--tetrahydrofolate ligase [Populus euphratica]
3 Hb_001195_370 0.1065701654 - - -
4 Hb_030312_030 0.1108813447 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
5 Hb_001054_060 0.114036971 - - PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Jatropha curcas]
6 Hb_000768_150 0.1150985197 - - PREDICTED: glycine-rich protein A3-like [Fragaria vesca subsp. vesca]
7 Hb_000329_080 0.1200205479 - - PREDICTED: transketolase, chloroplastic [Jatropha curcas]
8 Hb_000997_290 0.1207513415 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
9 Hb_003783_050 0.1242431468 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001916_150 0.126689615 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-3 [Vitis vinifera]
11 Hb_009803_020 0.1276636291 - - hypothetical protein PRUPE_ppa006317mg [Prunus persica]
12 Hb_035834_010 0.1303950818 - - zinc finger protein, putative [Ricinus communis]
13 Hb_000300_680 0.1339651379 - - PREDICTED: uncharacterized protein LOC105632625 isoform X1 [Jatropha curcas]
14 Hb_067664_010 0.1375616445 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
15 Hb_001365_010 0.1379182015 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
16 Hb_000163_110 0.1401474733 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
17 Hb_006736_050 0.1438753982 - - hypothetical protein POPTR_0006s04450g [Populus trichocarpa]
18 Hb_000313_230 0.1440242081 - - PREDICTED: uncharacterized protein LOC105636893 [Jatropha curcas]
19 Hb_000977_150 0.1455963673 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
20 Hb_033683_010 0.1478467451 - - myo inositol monophosphatase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000997_320 Hb_000997_320 Hb_036388_010 Hb_036388_010 Hb_000997_320--Hb_036388_010 Hb_001195_370 Hb_001195_370 Hb_000997_320--Hb_001195_370 Hb_030312_030 Hb_030312_030 Hb_000997_320--Hb_030312_030 Hb_001054_060 Hb_001054_060 Hb_000997_320--Hb_001054_060 Hb_000768_150 Hb_000768_150 Hb_000997_320--Hb_000768_150 Hb_000329_080 Hb_000329_080 Hb_000997_320--Hb_000329_080 Hb_036388_010--Hb_000768_150 Hb_035834_010 Hb_035834_010 Hb_036388_010--Hb_035834_010 Hb_003783_050 Hb_003783_050 Hb_036388_010--Hb_003783_050 Hb_006736_050 Hb_006736_050 Hb_036388_010--Hb_006736_050 Hb_000417_380 Hb_000417_380 Hb_036388_010--Hb_000417_380 Hb_001195_370--Hb_030312_030 Hb_000997_290 Hb_000997_290 Hb_001195_370--Hb_000997_290 Hb_001195_370--Hb_000329_080 Hb_000366_030 Hb_000366_030 Hb_001195_370--Hb_000366_030 Hb_001080_150 Hb_001080_150 Hb_001195_370--Hb_001080_150 Hb_030312_030--Hb_003783_050 Hb_030312_030--Hb_001054_060 Hb_000941_120 Hb_000941_120 Hb_030312_030--Hb_000941_120 Hb_003006_080 Hb_003006_080 Hb_030312_030--Hb_003006_080 Hb_002805_090 Hb_002805_090 Hb_030312_030--Hb_002805_090 Hb_000032_600 Hb_000032_600 Hb_001054_060--Hb_000032_600 Hb_187959_010 Hb_187959_010 Hb_001054_060--Hb_187959_010 Hb_067664_010 Hb_067664_010 Hb_001054_060--Hb_067664_010 Hb_000977_150 Hb_000977_150 Hb_001054_060--Hb_000977_150 Hb_000768_150--Hb_030312_030 Hb_012053_020 Hb_012053_020 Hb_000768_150--Hb_012053_020 Hb_009803_020 Hb_009803_020 Hb_000768_150--Hb_009803_020 Hb_004326_010 Hb_004326_010 Hb_000768_150--Hb_004326_010 Hb_001365_010 Hb_001365_010 Hb_000329_080--Hb_001365_010 Hb_000163_110 Hb_000163_110 Hb_000329_080--Hb_000163_110 Hb_000300_680 Hb_000300_680 Hb_000329_080--Hb_000300_680 Hb_001811_080 Hb_001811_080 Hb_000329_080--Hb_001811_080 Hb_000329_080--Hb_000977_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.296309 0.995548 1.89418 4.08865 0.180502 0.401248
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.701597 0.294313 0.27197 2.76244 6.27456

CAGE analysis