Hb_001008_100

Information

Type -
Description -
Location Contig1008: 105662-108519
Sequence    

Annotation

kegg
ID rcu:RCOM_0897890
description hypothetical protein
nr
ID BAJ53247.1
description JHL25H03.10 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUD7
description JHL25H03.10 protein OS=Jatropha curcas GN=JHL25H03.10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001008_100 0.0 - - JHL25H03.10 [Jatropha curcas]
2 Hb_000856_300 0.0784977765 - - PREDICTED: uncharacterized protein LOC105640498 [Jatropha curcas]
3 Hb_000926_150 0.0938015772 - - PREDICTED: splicing factor, suppressor of white-apricot homolog isoform X1 [Jatropha curcas]
4 Hb_008948_140 0.09798525 - - PREDICTED: nuclear pore complex protein NUP205 [Jatropha curcas]
5 Hb_000661_120 0.0983916137 - - cap binding protein, putative [Ricinus communis]
6 Hb_003633_090 0.0995985921 - - arginine/serine-rich splicing factor, putative [Ricinus communis]
7 Hb_089140_040 0.1004794137 - - PREDICTED: uncharacterized protein LOC105637966 [Jatropha curcas]
8 Hb_003636_080 0.1013395521 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 [Jatropha curcas]
9 Hb_000954_010 0.1019022118 - - PREDICTED: uncharacterized protein LOC105646975 [Jatropha curcas]
10 Hb_001300_280 0.1019443907 - - PREDICTED: mitochondrial substrate carrier family protein ucpB [Jatropha curcas]
11 Hb_016461_020 0.1027655512 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000173_190 0.1032210696 - - conserved hypothetical protein [Ricinus communis]
13 Hb_012092_050 0.1048656175 - - PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform X1 [Jatropha curcas]
14 Hb_003906_180 0.1056806104 - - unknown [Zea mays]
15 Hb_000787_200 0.1103758626 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_001408_110 0.1105938365 - - hypothetical protein EUGRSUZ_I02762 [Eucalyptus grandis]
17 Hb_000297_030 0.1133123751 - - PREDICTED: mitogen-activated protein kinase kinase 2 isoform X1 [Jatropha curcas]
18 Hb_002812_010 0.1134815449 - - PREDICTED: chitin elicitor receptor kinase 1 isoform X1 [Jatropha curcas]
19 Hb_178968_060 0.1143030423 - - PREDICTED: ubiquitin receptor RAD23b-like [Gossypium raimondii]
20 Hb_012539_110 0.115190491 - - PREDICTED: ER membrane protein complex subunit 1 [Jatropha curcas]

Gene co-expression network

sample Hb_001008_100 Hb_001008_100 Hb_000856_300 Hb_000856_300 Hb_001008_100--Hb_000856_300 Hb_000926_150 Hb_000926_150 Hb_001008_100--Hb_000926_150 Hb_008948_140 Hb_008948_140 Hb_001008_100--Hb_008948_140 Hb_000661_120 Hb_000661_120 Hb_001008_100--Hb_000661_120 Hb_003633_090 Hb_003633_090 Hb_001008_100--Hb_003633_090 Hb_089140_040 Hb_089140_040 Hb_001008_100--Hb_089140_040 Hb_000856_300--Hb_008948_140 Hb_000856_300--Hb_000926_150 Hb_000580_050 Hb_000580_050 Hb_000856_300--Hb_000580_050 Hb_000373_170 Hb_000373_170 Hb_000856_300--Hb_000373_170 Hb_000787_200 Hb_000787_200 Hb_000856_300--Hb_000787_200 Hb_116349_130 Hb_116349_130 Hb_000926_150--Hb_116349_130 Hb_000035_100 Hb_000035_100 Hb_000926_150--Hb_000035_100 Hb_001257_100 Hb_001257_100 Hb_000926_150--Hb_001257_100 Hb_024650_080 Hb_024650_080 Hb_000926_150--Hb_024650_080 Hb_000926_150--Hb_000373_170 Hb_000479_240 Hb_000479_240 Hb_008948_140--Hb_000479_240 Hb_001341_160 Hb_001341_160 Hb_008948_140--Hb_001341_160 Hb_000862_040 Hb_000862_040 Hb_008948_140--Hb_000862_040 Hb_001723_010 Hb_001723_010 Hb_008948_140--Hb_001723_010 Hb_008948_140--Hb_000926_150 Hb_000996_020 Hb_000996_020 Hb_000661_120--Hb_000996_020 Hb_000445_060 Hb_000445_060 Hb_000661_120--Hb_000445_060 Hb_000661_120--Hb_000373_170 Hb_000340_030 Hb_000340_030 Hb_000661_120--Hb_000340_030 Hb_000529_060 Hb_000529_060 Hb_000661_120--Hb_000529_060 Hb_000868_120 Hb_000868_120 Hb_000661_120--Hb_000868_120 Hb_000260_760 Hb_000260_760 Hb_003633_090--Hb_000260_760 Hb_000172_360 Hb_000172_360 Hb_003633_090--Hb_000172_360 Hb_000172_340 Hb_000172_340 Hb_003633_090--Hb_000172_340 Hb_003633_090--Hb_000661_120 Hb_000954_010 Hb_000954_010 Hb_003633_090--Hb_000954_010 Hb_003633_090--Hb_000856_300 Hb_006468_010 Hb_006468_010 Hb_089140_040--Hb_006468_010 Hb_012092_050 Hb_012092_050 Hb_089140_040--Hb_012092_050 Hb_005489_140 Hb_005489_140 Hb_089140_040--Hb_005489_140 Hb_005215_020 Hb_005215_020 Hb_089140_040--Hb_005215_020 Hb_000008_420 Hb_000008_420 Hb_089140_040--Hb_000008_420 Hb_015026_130 Hb_015026_130 Hb_089140_040--Hb_015026_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.27956 9.09981 7.96811 7.35645 4.97626 3.90441
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.09893 5.33994 1.19236 7.92916 5.3682

CAGE analysis