Hb_001013_010

Information

Type -
Description -
Location Contig1013: 2261-3778
Sequence    

Annotation

kegg
ID rcu:RCOM_0431530
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002529227.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9FVS9
description Alkane hydroxylase MAH1 OS=Arabidopsis thaliana GN=CYP96A15 PE=2 SV=1
trembl
ID B9STA8
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0431530 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 86b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001013_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_001365_040 0.0990358749 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 [Populus euphratica]
3 Hb_000111_130 0.1166450129 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
4 Hb_000345_190 0.1204398528 transcription factor TF Family: C2H2 hypothetical protein POPTR_0005s02730g [Populus trichocarpa]
5 Hb_001363_030 0.1284873399 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Populus euphratica]
6 Hb_005396_100 0.1330740544 - - conserved hypothetical protein [Ricinus communis]
7 Hb_009778_030 0.1333742171 transcription factor TF Family: TCP PREDICTED: transcription factor TCP23-like [Populus euphratica]
8 Hb_001009_110 0.1360610965 - - PREDICTED: uncharacterized protein LOC105640232 [Jatropha curcas]
9 Hb_004970_130 0.1403385819 - - PREDICTED: uncharacterized protein LOC105633891 [Jatropha curcas]
10 Hb_149056_010 0.1417035583 - - hypothetical protein CICLE_v10016664mg [Citrus clementina]
11 Hb_002890_060 0.1420206719 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Eucalyptus grandis]
12 Hb_001363_010 0.1461721821 - - hypothetical protein CISIN_1g027763mg [Citrus sinensis]
13 Hb_000767_040 0.1463074282 - - cytochrome P450, putative [Ricinus communis]
14 Hb_135811_020 0.1548585678 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
15 Hb_000940_020 0.1555718152 - - hypothetical protein POPTR_0004s17500g [Populus trichocarpa]
16 Hb_000003_620 0.157432459 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
17 Hb_001274_040 0.1576622923 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
18 Hb_005054_300 0.1582455143 - - aquaporin [Hevea brasiliensis]
19 Hb_000146_110 0.1599599708 - - resveratrol/hydroxycinnamic acid O-glucosyltransferase [Vitis labrusca]
20 Hb_004586_380 0.161928256 - - purine transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_001013_010 Hb_001013_010 Hb_001365_040 Hb_001365_040 Hb_001013_010--Hb_001365_040 Hb_000111_130 Hb_000111_130 Hb_001013_010--Hb_000111_130 Hb_000345_190 Hb_000345_190 Hb_001013_010--Hb_000345_190 Hb_001363_030 Hb_001363_030 Hb_001013_010--Hb_001363_030 Hb_005396_100 Hb_005396_100 Hb_001013_010--Hb_005396_100 Hb_009778_030 Hb_009778_030 Hb_001013_010--Hb_009778_030 Hb_001365_040--Hb_001363_030 Hb_001365_040--Hb_000111_130 Hb_000003_620 Hb_000003_620 Hb_001365_040--Hb_000003_620 Hb_002025_370 Hb_002025_370 Hb_001365_040--Hb_002025_370 Hb_001365_040--Hb_009778_030 Hb_001274_040 Hb_001274_040 Hb_000111_130--Hb_001274_040 Hb_002890_060 Hb_002890_060 Hb_000111_130--Hb_002890_060 Hb_000111_130--Hb_000003_620 Hb_000111_130--Hb_009778_030 Hb_000146_110 Hb_000146_110 Hb_000111_130--Hb_000146_110 Hb_000532_060 Hb_000532_060 Hb_000345_190--Hb_000532_060 Hb_046117_050 Hb_046117_050 Hb_000345_190--Hb_046117_050 Hb_000170_230 Hb_000170_230 Hb_000345_190--Hb_000170_230 Hb_135811_020 Hb_135811_020 Hb_000345_190--Hb_135811_020 Hb_106969_010 Hb_106969_010 Hb_000345_190--Hb_106969_010 Hb_000345_190--Hb_005396_100 Hb_001363_030--Hb_000003_620 Hb_001363_030--Hb_009778_030 Hb_004970_130 Hb_004970_130 Hb_001363_030--Hb_004970_130 Hb_118777_010 Hb_118777_010 Hb_001363_030--Hb_118777_010 Hb_001363_030--Hb_000111_130 Hb_001363_010 Hb_001363_010 Hb_005396_100--Hb_001363_010 Hb_000977_160 Hb_000977_160 Hb_005396_100--Hb_000977_160 Hb_000233_060 Hb_000233_060 Hb_005396_100--Hb_000233_060 Hb_007785_020 Hb_007785_020 Hb_005396_100--Hb_007785_020 Hb_002067_110 Hb_002067_110 Hb_005396_100--Hb_002067_110 Hb_009778_030--Hb_000146_110 Hb_009778_030--Hb_000003_620 Hb_009778_030--Hb_002890_060 Hb_000123_310 Hb_000123_310 Hb_009778_030--Hb_000123_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.013523 20.9816 0.0413543 1.96062 0.0406475 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.41234 1.42028

CAGE analysis