Hb_001014_190

Information

Type -
Description -
Location Contig1014: 161604-165109
Sequence    

Annotation

kegg
ID pop:POPTR_0001s12930g
description POPTRDRAFT_640120; transaldolase family protein
nr
ID XP_012088708.1
description PREDICTED: uncharacterized protein LOC105647294 [Jatropha curcas]
swissprot
ID A0LTY8
description Transaldolase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=tal PE=3 SV=1
trembl
ID A0A067JTE6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23088 PE=3 SV=1
Gene Ontology
ID GO:0005739
description transaldolase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00717: 161940-165060
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001014_190 0.0 - - PREDICTED: uncharacterized protein LOC105647294 [Jatropha curcas]
2 Hb_029510_100 0.0761033679 - - scab resistance family protein [Populus trichocarpa]
3 Hb_005970_010 0.1103835632 - - PREDICTED: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 isoform X2 [Jatropha curcas]
4 Hb_004330_080 0.1110261326 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 [Jatropha curcas]
5 Hb_006683_020 0.1182675159 - - PREDICTED: nucleosome assembly protein 1;4 [Jatropha curcas]
6 Hb_000683_050 0.1251055035 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
7 Hb_019280_020 0.1253472657 - - PREDICTED: proline-rich receptor-like protein kinase PERK14 isoform X1 [Jatropha curcas]
8 Hb_000139_140 0.1255194899 - - Acyl-CoA synthetase [Ricinus communis]
9 Hb_000220_110 0.1275826405 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
10 Hb_001054_090 0.1289591516 - - Potassium channel SKOR, putative [Ricinus communis]
11 Hb_000120_230 0.1316539673 - - PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like [Jatropha curcas]
12 Hb_010872_040 0.136851501 - - hypothetical protein F775_31993 [Aegilops tauschii]
13 Hb_000009_060 0.1370770955 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
14 Hb_004094_020 0.138290915 - - Pyruvate kinase family protein isoform 1 [Theobroma cacao]
15 Hb_001616_070 0.1389367098 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
16 Hb_001021_010 0.1410702317 - - PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
17 Hb_012362_030 0.1423891389 - - PREDICTED: GPI-anchored protein LORELEI-like [Populus euphratica]
18 Hb_030565_110 0.142516946 - - PREDICTED: adenosylhomocysteinase 1 [Jatropha curcas]
19 Hb_001006_270 0.1449415335 - - peptide transporter, putative [Ricinus communis]
20 Hb_001900_100 0.1467795653 - - PREDICTED: uncharacterized protein LOC105632664 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001014_190 Hb_001014_190 Hb_029510_100 Hb_029510_100 Hb_001014_190--Hb_029510_100 Hb_005970_010 Hb_005970_010 Hb_001014_190--Hb_005970_010 Hb_004330_080 Hb_004330_080 Hb_001014_190--Hb_004330_080 Hb_006683_020 Hb_006683_020 Hb_001014_190--Hb_006683_020 Hb_000683_050 Hb_000683_050 Hb_001014_190--Hb_000683_050 Hb_019280_020 Hb_019280_020 Hb_001014_190--Hb_019280_020 Hb_029510_100--Hb_004330_080 Hb_029510_100--Hb_019280_020 Hb_004094_020 Hb_004094_020 Hb_029510_100--Hb_004094_020 Hb_000120_230 Hb_000120_230 Hb_029510_100--Hb_000120_230 Hb_012362_030 Hb_012362_030 Hb_029510_100--Hb_012362_030 Hb_001085_080 Hb_001085_080 Hb_005970_010--Hb_001085_080 Hb_000000_120 Hb_000000_120 Hb_005970_010--Hb_000000_120 Hb_012180_010 Hb_012180_010 Hb_005970_010--Hb_012180_010 Hb_001097_040 Hb_001097_040 Hb_005970_010--Hb_001097_040 Hb_003506_020 Hb_003506_020 Hb_005970_010--Hb_003506_020 Hb_028077_020 Hb_028077_020 Hb_005970_010--Hb_028077_020 Hb_135757_020 Hb_135757_020 Hb_004330_080--Hb_135757_020 Hb_004330_080--Hb_004094_020 Hb_000029_440 Hb_000029_440 Hb_004330_080--Hb_000029_440 Hb_030565_110 Hb_030565_110 Hb_004330_080--Hb_030565_110 Hb_006683_020--Hb_001097_040 Hb_016734_010 Hb_016734_010 Hb_006683_020--Hb_016734_010 Hb_019280_010 Hb_019280_010 Hb_006683_020--Hb_019280_010 Hb_006683_020--Hb_000683_050 Hb_000701_030 Hb_000701_030 Hb_006683_020--Hb_000701_030 Hb_005914_140 Hb_005914_140 Hb_006683_020--Hb_005914_140 Hb_007416_070 Hb_007416_070 Hb_000683_050--Hb_007416_070 Hb_000494_030 Hb_000494_030 Hb_000683_050--Hb_000494_030 Hb_004030_060 Hb_004030_060 Hb_000683_050--Hb_004030_060 Hb_001811_170 Hb_001811_170 Hb_000683_050--Hb_001811_170 Hb_010390_010 Hb_010390_010 Hb_000683_050--Hb_010390_010 Hb_005854_040 Hb_005854_040 Hb_000683_050--Hb_005854_040 Hb_019280_020--Hb_012362_030 Hb_001481_150 Hb_001481_150 Hb_019280_020--Hb_001481_150 Hb_000152_710 Hb_000152_710 Hb_019280_020--Hb_000152_710 Hb_033152_070 Hb_033152_070 Hb_019280_020--Hb_033152_070 Hb_004525_040 Hb_004525_040 Hb_019280_020--Hb_004525_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
25.0104 62.9174 47.1214 180.784 19.9852 17.5144
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.2155 32.5263 26.2996 143.151 52.3854

CAGE analysis