Hb_001014_210

Information

Type -
Description -
Location Contig1014: 168060-171009
Sequence    

Annotation

kegg
ID pop:POPTR_0003s16010g
description POPTRDRAFT_554675; cytochrome p450 51 family protein
nr
ID AIU41378.1
description CYP51 [Hevea brasiliensis]
swissprot
ID Q9SAA9
description Sterol 14-demethylase OS=Arabidopsis thaliana GN=CYP51G1 PE=1 SV=1
trembl
ID A0A097P981
description CYP51 OS=Hevea brasiliensis GN=CYP51 PE=2 SV=1
Gene Ontology
ID GO:0005783
description sterol 14-demethylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00719: 169121-170271 , PASA_asmbl_00720: 170542-170726
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001014_210 0.0 - - CYP51 [Hevea brasiliensis]
2 Hb_001258_110 0.060769144 - - transporter, putative [Ricinus communis]
3 Hb_000130_180 0.0774623006 - - PREDICTED: GPI inositol-deacylase-like isoform X2 [Jatropha curcas]
4 Hb_003683_020 0.0778941831 - - serine/threonine protein kinase, putative [Ricinus communis]
5 Hb_009569_040 0.077895396 - - PREDICTED: uncharacterized protein LOC105635573 [Jatropha curcas]
6 Hb_000208_280 0.0781434049 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 78 [Jatropha curcas]
7 Hb_007481_010 0.0803661508 - - PREDICTED: TBC1 domain family member 22B [Jatropha curcas]
8 Hb_002728_080 0.0822485034 - - WD-repeat protein, putative [Ricinus communis]
9 Hb_004102_170 0.0824858 - - PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Jatropha curcas]
10 Hb_000352_300 0.0825425402 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
11 Hb_000477_100 0.0828534699 - - PREDICTED: GDP-mannose transporter GONST4 [Jatropha curcas]
12 Hb_000238_030 0.0834401885 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_005797_010 0.0846048428 - - PREDICTED: lysophospholipid acyltransferase 1-like [Jatropha curcas]
14 Hb_010142_020 0.0847680784 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005663_110 0.0851353702 - - PREDICTED: large proline-rich protein BAG6 isoform X2 [Jatropha curcas]
16 Hb_000140_350 0.0854774743 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001442_060 0.0926992328 - - PREDICTED: uncharacterized protein LOC105638091 isoform X1 [Jatropha curcas]
18 Hb_000146_040 0.0927361565 - - PREDICTED: reticulon-like protein B11 [Jatropha curcas]
19 Hb_001662_100 0.0933701244 - - PREDICTED: serine/threonine-protein kinase EDR1-like [Jatropha curcas]
20 Hb_001434_080 0.0945440848 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]

Gene co-expression network

sample Hb_001014_210 Hb_001014_210 Hb_001258_110 Hb_001258_110 Hb_001014_210--Hb_001258_110 Hb_000130_180 Hb_000130_180 Hb_001014_210--Hb_000130_180 Hb_003683_020 Hb_003683_020 Hb_001014_210--Hb_003683_020 Hb_009569_040 Hb_009569_040 Hb_001014_210--Hb_009569_040 Hb_000208_280 Hb_000208_280 Hb_001014_210--Hb_000208_280 Hb_007481_010 Hb_007481_010 Hb_001014_210--Hb_007481_010 Hb_002284_250 Hb_002284_250 Hb_001258_110--Hb_002284_250 Hb_005663_110 Hb_005663_110 Hb_001258_110--Hb_005663_110 Hb_001258_110--Hb_000130_180 Hb_015026_130 Hb_015026_130 Hb_001258_110--Hb_015026_130 Hb_001434_080 Hb_001434_080 Hb_001258_110--Hb_001434_080 Hb_001821_150 Hb_001821_150 Hb_000130_180--Hb_001821_150 Hb_000140_350 Hb_000140_350 Hb_000130_180--Hb_000140_350 Hb_000130_180--Hb_002284_250 Hb_004531_120 Hb_004531_120 Hb_000130_180--Hb_004531_120 Hb_012498_010 Hb_012498_010 Hb_003683_020--Hb_012498_010 Hb_010142_020 Hb_010142_020 Hb_003683_020--Hb_010142_020 Hb_013399_020 Hb_013399_020 Hb_003683_020--Hb_013399_020 Hb_003528_030 Hb_003528_030 Hb_003683_020--Hb_003528_030 Hb_000159_090 Hb_000159_090 Hb_003683_020--Hb_000159_090 Hb_000260_330 Hb_000260_330 Hb_003683_020--Hb_000260_330 Hb_001662_100 Hb_001662_100 Hb_009569_040--Hb_001662_100 Hb_000256_150 Hb_000256_150 Hb_009569_040--Hb_000256_150 Hb_005725_130 Hb_005725_130 Hb_009569_040--Hb_005725_130 Hb_000049_020 Hb_000049_020 Hb_009569_040--Hb_000049_020 Hb_009569_040--Hb_007481_010 Hb_002414_050 Hb_002414_050 Hb_009569_040--Hb_002414_050 Hb_000487_270 Hb_000487_270 Hb_000208_280--Hb_000487_270 Hb_000192_080 Hb_000192_080 Hb_000208_280--Hb_000192_080 Hb_012114_100 Hb_012114_100 Hb_000208_280--Hb_012114_100 Hb_000208_280--Hb_000140_350 Hb_001679_050 Hb_001679_050 Hb_000208_280--Hb_001679_050 Hb_000836_280 Hb_000836_280 Hb_000208_280--Hb_000836_280 Hb_007481_010--Hb_003528_030 Hb_000352_300 Hb_000352_300 Hb_007481_010--Hb_000352_300 Hb_001269_330 Hb_001269_330 Hb_007481_010--Hb_001269_330 Hb_007481_010--Hb_000256_150 Hb_000477_100 Hb_000477_100 Hb_007481_010--Hb_000477_100 Hb_000046_500 Hb_000046_500 Hb_007481_010--Hb_000046_500
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.99883 10.7756 7.30652 25.8588 11.4162 12.5991
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.037 9.28483 8.93804 17.6914 12.2915

CAGE analysis