Hb_001016_070

Information

Type -
Description -
Location Contig1016: 90957-93619
Sequence    

Annotation

kegg
ID rcu:RCOM_0495200
description Calcium-binding protein, putative
nr
ID XP_012081409.1
description PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
swissprot
ID Q9FGK3
description Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1
trembl
ID A0A067K180
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18456 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001016_070 0.0 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
2 Hb_000363_270 0.1747024798 - - hypothetical protein PRUPE_ppa024846mg [Prunus persica]
3 Hb_001817_140 0.2184747769 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
4 Hb_001623_070 0.2423867194 - - cytochrome B5 isoform 1, putative [Ricinus communis]
5 Hb_011224_040 0.2696955152 - - PREDICTED: ER membrane protein complex subunit 8/9 homolog [Jatropha curcas]
6 Hb_000975_270 0.2735938176 - - PREDICTED: histone H2B.11-like [Phoenix dactylifera]
7 Hb_186158_010 0.2761545385 - - conserved hypothetical protein [Ricinus communis]
8 Hb_092449_010 0.282722813 - - -
9 Hb_001911_070 0.2901710234 - - -
10 Hb_013399_010 0.2927304884 - - PREDICTED: uncharacterized protein LOC105631404 isoform X2 [Jatropha curcas]
11 Hb_002890_070 0.3004140421 - - ATP-dependent RNA helicase family protein [Populus trichocarpa]
12 Hb_001754_140 0.3051768709 - - PREDICTED: uncharacterized protein LOC105643419 [Jatropha curcas]
13 Hb_004241_010 0.3070487469 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
14 Hb_003376_380 0.307613991 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Jatropha curcas]
15 Hb_000139_430 0.3086680841 transcription factor TF Family: B3 PREDICTED: uncharacterized protein LOC104882266 isoform X2 [Vitis vinifera]
16 Hb_006816_400 0.3097893144 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
17 Hb_001348_200 0.3106578376 - - -
18 Hb_012379_010 0.3107734018 - - -
19 Hb_003398_020 0.3164772546 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
20 Hb_007885_010 0.3167310613 - - 60S ribosomal protein L24-1 isoform 1 [Theobroma cacao]

Gene co-expression network

sample Hb_001016_070 Hb_001016_070 Hb_000363_270 Hb_000363_270 Hb_001016_070--Hb_000363_270 Hb_001817_140 Hb_001817_140 Hb_001016_070--Hb_001817_140 Hb_001623_070 Hb_001623_070 Hb_001016_070--Hb_001623_070 Hb_011224_040 Hb_011224_040 Hb_001016_070--Hb_011224_040 Hb_000975_270 Hb_000975_270 Hb_001016_070--Hb_000975_270 Hb_186158_010 Hb_186158_010 Hb_001016_070--Hb_186158_010 Hb_000363_270--Hb_001817_140 Hb_000363_270--Hb_186158_010 Hb_000363_270--Hb_001623_070 Hb_002259_140 Hb_002259_140 Hb_000363_270--Hb_002259_140 Hb_001911_070 Hb_001911_070 Hb_000363_270--Hb_001911_070 Hb_001817_140--Hb_001911_070 Hb_001754_140 Hb_001754_140 Hb_001817_140--Hb_001754_140 Hb_001817_140--Hb_001623_070 Hb_001102_100 Hb_001102_100 Hb_001817_140--Hb_001102_100 Hb_002890_070 Hb_002890_070 Hb_001623_070--Hb_002890_070 Hb_003376_380 Hb_003376_380 Hb_001623_070--Hb_003376_380 Hb_003398_020 Hb_003398_020 Hb_001623_070--Hb_003398_020 Hb_001439_090 Hb_001439_090 Hb_001623_070--Hb_001439_090 Hb_011609_110 Hb_011609_110 Hb_001623_070--Hb_011609_110 Hb_042871_010 Hb_042871_010 Hb_001623_070--Hb_042871_010 Hb_000500_210 Hb_000500_210 Hb_011224_040--Hb_000500_210 Hb_000046_200 Hb_000046_200 Hb_011224_040--Hb_000046_200 Hb_002526_020 Hb_002526_020 Hb_011224_040--Hb_002526_020 Hb_000434_020 Hb_000434_020 Hb_011224_040--Hb_000434_020 Hb_004429_110 Hb_004429_110 Hb_011224_040--Hb_004429_110 Hb_011224_040--Hb_000975_270 Hb_032974_010 Hb_032974_010 Hb_000975_270--Hb_032974_010 Hb_005714_050 Hb_005714_050 Hb_000975_270--Hb_005714_050 Hb_000975_270--Hb_186158_010 Hb_000975_270--Hb_000046_200 Hb_069022_010 Hb_069022_010 Hb_000975_270--Hb_069022_010 Hb_186158_010--Hb_000046_200 Hb_186158_010--Hb_032974_010 Hb_186158_010--Hb_011224_040 Hb_182005_010 Hb_182005_010 Hb_186158_010--Hb_182005_010 Hb_005199_010 Hb_005199_010 Hb_186158_010--Hb_005199_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0344707 0.189385 0.086502 0 0.0856679
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.189489 0.670678 0 0.0149649 0

CAGE analysis